Detail



ID : Ahg939874

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|939874|scaffold_600418.1
Sequence
TTTTCCCATC AGATTCATAA GAAATGGCAA GTTCTTCAGG AAATGTGCTA AGTTCTTCAC AAGGAGTGGC CGGGTCTTCA GGAAATGTGC CAGGTTCTTC ACAAGGAGTG TCAGATTTAG GTGAAATTTG TGAATATTTA TCATTATCAC AAAACATTAG CGACGATGAT TTGGAACACG TTAAAGTAAA GTTCTCGAAC CTGCAGAGAG ACACAACTAC TGCCTGGATC GACCCATTTG AGACACCATT GCAAAACGCA TGTAGTCGCC GTCAGTTGGC CGAGATCGTC AAGAAGCTAC TATTGCACGA AATGACGAGT CGTGGCCAAA TGGCAAATGA CATTTATTGT CAAAGTTTAG CGCTCGATAT TGCTGCTGGG AGTGGCAATT TGAAGATGGT TAGGGACCTG TGTGAACTCT ATCCCAACCA GCTGCTTGCT CAAGATAATT CAGTTTCCTA TGGGCTAGCA ATACCGGTTG TGCGGGCATC TAATGCAGGC CATGGAAAGG TCACTGGCAA CCTTTATTTC AACAATCAGA ATATACTTCT TCCTATTTTG AAGGATAAAC AAGGATATTG GGCTACCTGT CTCCTTCTGG ATGCCATATT TTATGGATTT CTAGCTTGGT TTCATGGGCT GTTAGACATT GCGTTGGACA TCATCATAAA TGTACCGTCT GTGGCCGTGA CTAAACACGC AAGTCAAAGA TCAACTCCAC TTAAGTTCTT AGCTTTGAAA CCTGACTTGT TTCATAGCCA CTCGGCCCAC TCCAATCTTG GATTTTGGCG ACGCTTCATC TACTCTTGTA TCATGCAAAC ATATGATCTA AAAGAAAGAC ATTCTCAAGC TCAAAACTTG CTAAAAAAAA TGTGCACAGA ACTACCAGGC ATGGTCAAGG ACAATAGTTG GAAAGAGATG GTCTATGGAG CACTACTTGA AGCGGTGAAG AATGGGAACA AGGAATTTTT CATTGAGATA ATCAAATGTA ACCCTCAACT TCTTTGGATC TCGAAAGCTG ACTCTGGCCG AAACCTCTTT CAGCTGGCCG TTGAATTCAA GAAAGATAAG ATCTTTAACC TCATACATGG TTTAGATGAT AGAAAGGTCA CGCTGCTTAG ATCTTACGAC AATAAAAACA ACAACATTCT CCATATCGCC GCTCATCTCT CTACTCCCGA CCAACTTTCT AAGATTTCTG GAGCTGCTCT CAAGATGCAA AGAGAGACTC AATGGTTTAA GGAAGTAAAA AGCTTGGTAT CAGAACGTGA AGTAGTGCAA AAAAACAACA AGAAGAAGAC CCCGCGACAA ATATTCGAAG ATTCTCACGA AACTTTACGA AAAGAAGGAG AAGAATGGAT GAAATACACT GCCACTGCTT GTAGCTTCGT GGCAGCTCTC ATTGCAACTG TCACTTTTCA AGCCATATTC ACTGTTCCTG GAGGTACTGA TCAAACTTCG GGTGCACCTA TCCTTCTTCA TGACTTACAT TTCACGGGGT TCATCTTCAC AAACACTCTC GCCTTCTTCG CCTCCTGCAT CTCTGTGCTC ATATTCCTCA ACATTCTGAC CTCAAGGTAC TCTTTTGATG ACTTCATTGT ATCACTTCCT AGAAAGATGA TATTGGGTCA ATCAATTCTG TTTATCTCTA TTGCCTCAAT GCTTGTTTCA TTTATCACGT CCCTTTCCGC GTCAATGCGG CACAGGCCAA CGCTTGTAGT CCCACTCAAG CCACTCGCCA GCTTCCCTTC GATTCTCTTC TTGATGTTGC AATATCCTCT TCTCAAGGAG ATGATTTCTT CCACCTATGG CAAACGACTC TTCTACCGCG ATACAAAGAA TTGGCTACCA TGAGTAGATA TTACACAAGG ATCT 
Length1874
Protein Sequence
Protein Residue
Map Locationscaffold_6: 1566269.. 1569536
Download Sequence
A.thaliana
AGI-codeAT5G04730.1
DescriptionAnkyrin-repeat containing protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
2.44949 Ahg342754 Plant self-incompatibility protein S1 family
9.53939 Ahg493812 Protein kinase family protein
13.9642 Ahg893541 F-box family protein
17.6068 Ahg925761 CLAVATA3/ESR-RELATED 18
32.0312 Ahg917467 Protein of unknown function (DUF295)
39.2428 Ahg932108
40.6202 Ahg895182 pentatricopeptide (PPR) repeat-containing protein
41.2553 Ahg948598
43.3359 Ahg913292
47.7179 Ahg347386
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression