Detail



ID : Ahg939879

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|939879|scaffold_600423.1
Sequence
TTTAGGCCTG TGGCCCAAAC TAAGTATGTT GTCGCTTTCG CTGCCAAGTA AGAACATTCT TGGTTTCACG GCGAACTTCT TGATCCGATG CAAGATCTTA CCCAGAAGAA GCAATACGAG TTCTCTCTCC CGAAACATCT CCGTATTCGC CAGTTATGAG CAGGAGGAAT TATCACCGGG ACGATATAGC GATGAGTTTA ATGTGGTTCA AGCTTCTGAC TTTATCGAAA TTTTGCAGCT TTGTGCTAGA AACGGAGCTG TTATGGAAGC AAAAGCTTGC CATGGGAAAA TTATGCGTAT GGAGTTGCAG GGAGATGTCA CTCTGTCAAA TGTTCTTATT AATGCTTATT CCAAGTGTGG TTTTGTGGAG CTTGCTCGCC AAGTGTTTGA TGGAATGCTT GAAAGAAGCT TGGTTTCTTG GAACACCATG ATTGGTTTGT ATACACGGAA CAGAATGGAG TCAGAAGCAT TGGATATTTT TTGGGAGATG AGAAACGAAG GGTTTAAGTT TAGCGAATTC ACGATATCGA GTGTTCTTTC TGCTTGTGGG GCAAATTGTG ATGCCTTGGA ATGCAAAAAA TTGCATTCTT TGTCAGTTAA GACATGTCTT GACTTGAACT TGTATGTTGG TACTGCTTTG CTTGATCTTT ACGCAAAATG TGGCATGATC AACGATGCAG TGCAGGTTTT CGAGTCTATG CAGGACAAGA GTTCAGTTAC ATGGAGTTCT ATGGTAGCAG GTTATGTTCA GAGCAAAAAC TATGAAGAGG CTCTCCTTCT TTACCGTCGA GCTCAAAGAA TGAGTTTAGA GCAGAATCAG TTTACATTAT CTTCAGTAAT TTGCGCTTGT TCAAATCTGG CAGCTTTAAT AGAAGGGAAA CAGATGCATG CTGTTATACG TAAGTCCGGG TTTGGTTCTA ATGTCTTTGT GGCATCCTCT GCAGTTGATA TGTATGCTAA ATGTGGAAGC TTGAGAGAGT CTTATATTAT CTTCTCGGAA GTGAAAGAGA AGAATATTGA GCTTTGGAAT ACGATCATCT CGGGGTTTGC AAAGCATGCT CGTCCTAAGG AAGTGATGAT CTTGTTTGAG AAAATGCAGC AAGATGGAAT GCACCCAAAT GAGGTTACTT TTAGTTCCCT GTTATCGGTT TGTGGTCACA CGGGTTTGGT CGAGGAAGGA AGGAGATTTT TCAAACTCAT GAGAACCACA TACGGTCTGT CACCAAATGT GGTTCATTAC TCCTGTATGG TTGATATTCT TGGTCGTGCT GGCCTATTGT CTGAAGCGTA CGAGTTGATA AAGTCTATTC CTTTCGAGCC TACAGCTTCC ATTTGGGGTT CTCTTCTTGC TTCATGTCGA GTTTACAAAA ACCTCGAGCT GGCTGAAGTT GCAGCCAAAA AATTATTCGA ATTAGAACCA GAAAATGCCG GTAATCACGT CTTACTATCC AATATATATG CGGCAAACAA ACAGTGGGAG GAAATCGCCA AATCAAGGAA GCTTCTAAGG GACTGCGACG TGAAAAAAGT AAGAGGACAA AGTTGGATTG ACATTAAGGA CAAGGTCCAC ATTTTCCGTG TTGGAGAAAG CAGTCATCCG AGAATCCGTG AGATCTGTTC GATGCTAGAC AATCTAGTTA TCGAATTGAG AAAGTTTGGA TATAAACCAA GCGTAGAACA CGAGCTGCAC GATGTGGAGA TAGGAAAGAA AGAGAAGCTT TTGATGCAAC ATAGTGAGAA ACTGGCTTTG GTTTTTGGTC TAATGTGTTT ACCAGAGGGT TCTACAGTGA GGATCATGAA GAATCTGAGG ATTTGTGTTG ATTGCCATGA GTTTATGAAG GCTGCTTCAA TGGCTACAAG AAGATTTATC ATTGTTAGAG ATGCTAATAG GTTTCACCAT TTCAGTGATG GTCATTGTTC TTGTGGCGAA TTTTGGTGAC AAAACTCTGT TTTAGGATC 
Length1959
Protein Sequence
Protein Residue
Map Locationscaffold_6: 1587435.. 1589393
Download Sequence
A.thaliana
AGI-codeAT5G04780.1
DescriptionPentatricopeptide repeat (PPR) superfamily protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
25.4165 Ahg346776
31.3209 Ahg945003 F-box and associated interaction domains-containing protein
53.963 Ahg490800
73.3212 Ahg903465
73.6207 Ahg494488 Protein with RNI-like/FBD-like domains
74.5185 Ahg907833
83.3307 Ahg478843 Protein of unknown function (DUF567)
89.3308 Ahg471873
89.7162 Ahg490148
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression