Detail


ID : Ahg939949

Blast(Query):  A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|939949|scaffold_600493.1
Sequence
TCTTTAGCCC CTCAGCAAAA TCATGAAGCT TACAGAATAT TCCCATATTT TATTTCTTTC ACTATTCACC ATCAACTTCT ACATTATAAA CTCCGACGAC AACGGAGGCT GGGAGAGAGG CCATGCTACC TTCTACGGTG GAGATGATGC ATCCGGCACA ATGGGTGGTG CTTGTGGGTA CGGTAACTTA CACAGCCAAG GCTATGGGCT ACAAACCGCG GCTTTGAGCA CGGCTTTGTT CAATAGTGGG CAGAAATGTG GGGCCTGCTT TGAGCTACAA TGTGAGGATG ATCCTGAGTG GTGCATCCCT GGTTCCATCA TCGTCTCAGC TACAAACTTC TGTCCTCCAA ACTTTGCCTT AGCCAATGAT AATGGTGGTT GGTGCAATCC TCCTCTCAAG CACTTTGACT TGGCCGAGCC TGCCTTCCTC CAGATCGCTC AGTACCGGGC TGGAATCGTT CCTGTCGCAT TCAGAAGGGT TCCATGTGAG AAAGGTGGAG GGATAAGGTT CACGATCAAC GGGAATCCGT ATTTCGACCT CGTGTTGATC ACAAACGTGG GTGGTGCTGG AGATGTTAGG GCCGTCTCTT TGAAAGGCTC AAAGACTGAT CAGTGGCAAT CCATGTCAAG AAACTGGGGA CAGAATTGGC AAAGCAACAC TTACCTCAGA GGGCAAAGCC TATCTTTTCA AGTCACTGCT AGTGATGGTC AGACTGTTGT GAGCTACGAT GTTGTGCCTC AGGATTGGCA GTTCGGTCAA ACTTTTGAAG GTGGACAATT CTAGATTATG TACCAAGATA AAGT
Length804
Protein Sequence
Protein Residue
Map Locationscaffold_6: 1842301.. 1843291
Download Sequence
A.thaliana
AGI-codeAT5G05290.1
Descriptionexpansin A2
TAIR curator summaryEncodes an expansin. Naming convention from the Expansin Working Group (Kende et al, 2004. Plant Mol Bio)
Alias[ATEXP2][ATEXPA2][ATHEXP ALPHA 1.12][EXP2][EXPA2][expansin A2][EXPANSIN 2]
Gene coexpression
MR
MR Locus Description
22.3159 Ahg932118 Protein of unknown function (DUF1278)
31.305 Ahg356872 Ribosomal protein L23/L15e family protein
31.305 Ahg906443 Ribosomal protein L23/L15e family protein
31.4166 Ahg929770 Protein kinase superfamily protein
44.8553 Ahg948968
47.1487 Ahg914199 Plant invertase/pectin methylesterase inhibitor superfamily
58.4808 Ahg355133
61.1882 Ahg492644 Arabidopsis defensin-like protein
81.7802 Ahg332092 LJRHL1-like 3
88.3742 Ahg915188
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression