Detail



ID : Ahg940009

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|940009|scaffold_600553.1
Sequence
ATACCTTCAC TTCCTCTTTC ATGCCGGGAA TCGCCGTCGT TATCGCCGTA CTCACCGCGT TTTTCTCTAT CACTTTCTTA CTTCTCCTCT ACGTCAAACA CTGTAAACGA CGAAGCGGCT CCGTTTACGT AAACCACCCG CAGCGTTTCG CAATCTCTAG ATACGGAGGA GGATATTACA ACGGTGGAGG AGTAGGAGGA GGAAGAAAAA ATTCCGGTAT AGACCGGTCC GTGATTGAAT CTTTACCGGT TTTCCGGTTT GGTGCATTGA GCGGCCACAA GGATGGTTTA GAGTGCGCCG TGTGTCTCGC TCGGTTCGAA CCGGCGGAAG TTCTGAGGTT ATTGCCGAAA TGTAAACACG CCTTCCACGT GGAATGTGTT GACACGTGGC TCGACGCTCA CTCCACTTGC CCGCTTTGCC GTTACCGGGT TGACCCGGAA GATATACTCT TGATCGGTGA TTGTAACTCC TGGTTCGAGC TCCGTTTCTC TAAAGAAGAA TCAAACAGTA TTAGTAATCC TCCCGGTTTA ACCCGGTTTG TTCCGGTTAG TCGAATATCC GGTCGTCATT CATCGGCTGG TGAACGAGCG AGTCGACTCA ACGAGATTAG AACATCGTCG TCGTCTAAAT CGAATCCGAT GTCGTTTCGG AGATCACTCG ATAGCTCTCT GAAAGTTAAC GACGCCGGCG AGGAAAAATC GGAATCTGTC GCCGTTAATT GCTTGGATCG TCTACAGAGA AAAGACGGAT TGTTGTTGAT TCCGAATCAG GAGAGTATGG AAGGGAGATT TGAGCACCGG ATAATAATCT CCGGCGGGAA TCTAGATGAT CAGAGGTGGA GCGAGGTTAG GCCGTCGGAT CTTTTGTACT TACGGTCGGA GATGATACTA AGTGATTGCC GGAAATTAGC TGCGGCGGAG GGCGGCAGAG ATGTAATTAA CGGGAGAAGT GTGTCGGAGT TAACGGGAAT TGAGAGACGG AGGAGATGGG GAGGAGAGCC GAGACAACGA CAAGCCACGG CGGTGATTTC GAGGTGGCTC GCTTGGTCCC ACCGTGCCTC CGCTTCCAGC ATTGTTTAAA ATTTATATTT TTGGTCCTT 
Length1099
Protein Sequence
Protein Residue
Map Locationscaffold_6: 2052100.. 2053198
Download Sequence
A.thaliana
AGI-codeAT5G05810.1
DescriptionRING/U-box superfamily protein
TAIR curator summary
Alias[ATL43]
Gene coexpression
MR
MR Locus Description
38.8587 Ahg495065 ethylene response factor 110
60.7454 Ahg342636 AP2/B3-like transcriptional factor family protein
65.8179 Ahg493357 baruol synthase 1
90.9505 Ahg901222 homeobox-3
91.1318 Ahg485911 Papain family cysteine protease
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression