Detail


ID : Ahg940097

Blast(Query):  A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|940097|scaffold_600641.1
Sequence
CTTTTGGGCT CTTTTTGCCG AGAATGAGTA ACATTGTGCT CAACACACTT CGTTTCAAAC ACCCGAAGCT TGCATTGCTC CAATCCTGCT CTTCCTTCTC CGACCTCAAG ATCATCCATG GCTTTCTCTT ACGAACCCAT CTCATCTCCG ACGTCTTTGT TGCCAGTCGT CTCCTCGCTC TCGCTCTCTG CGTTGACGAC TCCACCTTCC ACAAACCCAC CAATCTCTTG GGATATGCAT ACGGAATCTT CTCTCAGATT CAAAACCCTA ATCTTTTCGT CTTCAACGTA CTCATTCGCT GCTTCTCCAC TGGCGCAGAA CCTAGTAAGG CTTTTGGGTT CTATACCCAG ATGTTGAAAT CTCGAATTTG GCCAGATAAC ATCACGTTTC CGTTTCTGAT TAAGGCGTCT ACTGAGATGG AGTGTGTGGT GGTGGGAGAG CAAACGCATT CACAGATTGT TAGATTCGGA TTTCAGAATG ATGTTTATGT AGAGAATTCT CTTGTTCATA TGTACGCTAA TTGTGGGTTG ATCGCTGCTG CTGGTAGAAT CTTTGGGCAA ATGCCGTTTC GAGATGTGGT TTCATGGACT TCTATGGTGG CTGGGTATTG CAAATGCGGG ATGGTTGAGG ATGCACGAGA GATGTTCGAT GAAATGCCCC ACAGAAATTT GTTTACTTGG AGTATCATGA TAAATGGGTA TGCGAAGAAC AACTGTTTTG AGAAAGCCAT TGACTTGTTC GAACTCATGA AAAGGGAAGG AGTTGTTGCG AATGAGACGG TTATGGTGAG TGTGATTTCT TCTTGTGCTC ATTTGGGTGC GCTTGAGTTT GGAGAAAGAG CACATGAGTA TGTGGTTAAG AGTCACATGA CTGTGAATCT TATTCTTGGG ACAGCTCTTG TGGATATGTA TTGGAGGTGT GGGGAAATCG AGAAAGCAAT TCGCGTGTTT GAGGAATTGC CTGACAAGGA TAGCTTGAGC TGGAGTTCGA TAATCAAAGG TCTTGCGGTG CATGGGCATG CTCACAAGGC AATTCATTAC TTCTCCCAAA TGGTTAGATT AGGGTTTATC CCAAGGGATA TTACACTCAC AGCGGTTCTT TCAGCTTGCA GCCATGGTGG GTTAGTTGAG AAAGGTTTAG AAATATATGA GAACATGAAA AGGGATTATG GGATCGAGCC TAGACTCGAG CATTATGGTT GCATTGTTGA CATGCTTGGC CGTGCTGGGA AATTGGCCGA AGCTGAAAAC TTTATCCTTA AAATGCCGGT GAAGCCAAAT GCTCCTATAT TGGGAGCATT GCTTGGAGCA TGTAAGATTT ATAAGAACAC CGAGGTCGCA GAGAGAGTAG GAAACATGTT GATAGAGGTG AAACCAGAAC ATAGCGGTTA CTATGTCTTG CTCTCTAATA TATACGCCTG TGCAGGACAA TGGGAGAAAC TCGAGAGCTT GAGAGACATT ATGAAGGAGA AGCTTGTTAA GAAACCACCA GGGTGGAGCT TAATAGAGAT TGATGGGAAA ATAAACAAGT TCTCCATGGG AGATGATCAG AAGCATCCTG AAATGGGTAA GATCAAAAGG TTGTGGGAAG AGATCTTGGG GAAAATAAGA TTGATAGGGT ATAAAGGAAA CACAGGTGAT GCGTTTTTCG ATGTAGACGA AGAAGAGAAG GAGACTGCGA TTCATATGCA TAGCGAGAAA CTTGCAATTG CATATGGTAT GATGAAGACT AAGACTGGTA CAACCATTAG GATAGTGAAG AACTTAAGGG TATGTGAGGA TTGTCACACT GCAACAAAGC TTATCTCTGA GGTTTATGGT AGAGAGTTTA TTGTAAGAGA CCGCAACAGG TTTCATCATT TTAGAAATGG ATTATGTTCC TGCAGAGATT ATTGGTGACA GTCTTTGTTT TAGTAGTTC
Length1919
Protein Sequence
Protein Residue
Map Locationscaffold_6: 2370973.. 2372498
Download Sequence
A.thaliana
AGI-codeAT5G06540.1
DescriptionPentatricopeptide repeat (PPR) superfamily protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
54.3231 Ahg356016 ATP-dependent RNA helicase, mitochondrial, putative
65.7571 Ahg477087 ARM repeat superfamily protein
81.9024 Ahg896310 Pentatricopeptide repeat (PPR) superfamily protein
81.9024 Ahg896306 Pentatricopeptide repeat (PPR) superfamily protein
88.9719 Ahg912989 Tetratricopeptide repeat (TPR)-like superfamily protein
99.1211 Ahg496782
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression