Detail



ID : Ahg940126

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|940126|scaffold_600670.1
Sequence
AGTCGAGAGA GATTCTAGCG ATGAAAACCA AACAGCAACT GCGATTCCTC GCTACAATTC TGTTCACGAC GATTCTATTT GTGCTGGCGA AGACTGATAC TGATCCGCTT GAAGTTTTGG CTCTTCAAGA TCTCTACAAG TCTCTGAGAA ATCCAGAGAA GCTGAGAGGA TGGAGATTGG AGGGTGGAGA TCCATGTGGA GAAGCCTGGA TCGGAGTTTC TTGTTCTGGC TCTTCTATAG TAGACCTACA ACTGAGAGAG TTAAAGCTTT TGGGAACCCT TGGAAACCAG CTTCAACATC TCCACAATTT GAAGATTCTG GATGTTAGCT TCAATAACCT TGAAGGCGAA ATTCCTTTTG GCTTGCCTCC AAACGCTACT CATATAAACA TGGCTTACAA TAATCTGACC CAAAGTATCC CTTTTTCCTT ACCTCTTTTG GCATCTCTTC AGTCTCTAAA TTTGAGCCAT AATTCATTAT CTGGACCTCT TGGAAATGTG TTTTCTGGGT TACAGATTAA AGAAATGGAT CTGTCATTCA ATAACCTGAC GGGAGATCTA CCAAGCTCTT TTGGATCTCT AATGAATCTG ACTTCACTGT ACCTCCAGAA CAACAGATTA ACAGGATCAG TCATCTATCT CGCGGATCTT CCTTTAGCTG ACCTGAACAT CGAAGATAAC CAGTTCAGTG GTATTATCCC AAGTCATTTT CAGTCCATTC CTCATCTGTG GATTTGGGGA AACAAGTTCC ATGTAGAGCC CAACTATAAA CCTTGGAAGT TCCCTTTGGA CGTCAGACCG TTGATACAAA ATGCTACTGG CTATCCAACA ACAGAGTCAA GTGCCATTAT GAACTTTCCC AGCCCTCAGA AGGTCAAAAA GAAGAAGAAA GGCATAGGAG CAGGAAGTAC CTTTTTACTG GTTGGTGGGT TAGCTTTGCT GGGAACTTTC TTTGCACTTT TCGCAGTCCG CATGAATCAT CGACGAGCAC AAAACCTTGC TGCTAGTCAC ATAAGCAACA ATAGCACAGC ATACTCTCTT CCAGTCAGTA CAAGCCGAGA ATATCCTGTT GCAACTGAAG ATAACCCACA GATGAAAAGG GTCCAGCCCC CACCAGTTCC ACAGCTCAGA CATTTACCTT CTCCACCTGT CAGAATCGAT AAATCTGCAA GAAGAAAGAG CTTCTCTGCC ACATGTCAAT ATCCATCGTT CGCTAAGCTT TTCTCAGCTG CAGAGCTTCA ACTGGCAACT AACTGTTTCA GCGAGGAAAA TCTACTCGGA GAGGGTCCTC TTGGTTCTGT TTACAGAGCA AAGTTGCCTG ATGGTCAGTT TGCCGTCGTC AGAAACATCC CAATGTCTTC GCTGTCTTTA CATGAAGAGG AACAATTTAC TGAAGTACTT CAGACAGCCT CCAAACTAAG ACACCCAAAC ATTGTTACAC TTCTCGGTTT CTGCATTGAG AATGGAGAGC ATCTTCTTGT CTATGAGTAT GTTGGGCATT TGTCGTTGTA CAATGCTATG CATGATGAGG TATACAAGCC ACTTTCTTGG GGCTTGCGTC TCCGCATTGC TATTGGAGTT GCCCGAGCTC TGGACTATTT GCACTCGTCG TTTTGCCCTC CTATAGCCCA TAGCGATCTG AAAGCAACAA ACATCTTACT TGACGAAGAA CTTACACCTC GTATTGCTGA CTGTGGGCTT GCTAGTTTAA GGCCACTTAC AAGCAACAGT GTTAAACTTC GGGCTTCAGA AATAGCGATA CAAAACACTG GCTACATAGC ACCAGAACAT GGACAACCAG GAAGCAGTGG CACAAAGAGT GACACTTATG CACTGGGAGT GCTACTCTTG GAACTGTTAA CAGGAAGGAA AGCATTTGAC AGCTCACGTC CCCGAGGAGA ACAGCTACTG GTGAAATGGG CATCAACCAG ACTGCATGAC AGGCGAAGCT TAGAACAGAT GATTGATGGA GGCATAGCTG GCACATTCTC CTCAAGAGTC GCTTCACAAT ACGCAGACAT AATCTCCCTA TGCACTCAGG TAGAGAAGGA GTTCAGACCA GCGGTTTCAG AAATAGTGGA AGCCCTCACT GCACTGATAC AGAAACAGAA CAAGGAAGCA AGCAGTAGTG TAGCAGACAA GACCGACCCT TTTAGTAAAT CTTTCTGCTC ATCACGCACT CGCTTCATCT CCTCTCCTAC CTTCAGCTAC CTCTCCTCTT GACCATTTTC TGTATCTCTT CT 
Length2242
Protein Sequence
Protein Residue
Map Locationscaffold_6: 2488755.. 2492407
Download Sequence
A.thaliana
AGI-codeAT5G06820.1
DescriptionSTRUBBELIG-receptor family 2
TAIR curator summary
Alias[SRF2][STRUBBELIG-receptor family 2]
Gene coexpression
MR
MR Locus Description
38.7427 Ahg351609 Protein of Unknown Function (DUF239)
43.8178 Ahg316828 cytochrome P450, family 79, subfamily C, polypeptide 1
45.3542 Ahg949012
55.0091 Ahg921560 FBD, F-box and Leucine Rich Repeat domains containing protein
69.5701 Ahg473700 transposable element gene
84.1606 Ahg315326 Nodulin MtN21 /EamA-like transporter family protein
85.7438 Ahg330052
86.2264 Ahg901222 homeobox-3
86.5679 Ahg927887 MATE efflux family protein
94.0638 Ahg926802
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression