Detail


ID : Ahg940424

Blast(Query):  A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|940424|scaffold_600968.1
Sequence
TGTTGTCTTG CAATCCAAGT TATGGCAGAT GATAATGGCG AAAACCCTAT GCCCAACGAT AGGGACTACA ATCATCTTCT CACCGCGTTC GCAAATCTTA ATGGCAACAG TAACATCAAC ACCAACAACA ACTACCCCAA TCTCAACGTT TATAACGTTA GTCATATCTC CACCGCTAGC TTCAACGCTC ATCCGGCTTG GATGACCCAA TCTCAACCTG GTGCTTCTTC CTCCAGATAC TCCGGCCAAC CCTTCCCTCC TCCTCCAAGT TTTGTGAGCC CCGGCGTCGA AAAGGATCAT AACTTGCTAT CAAGACTGTT GGACATGATG ACTTGTGCAG GACGTTTCGC TGAGTTCCAA AAGTTCCTCC AAGATCTCGA TACCAATCCA ACGGCTGAGA GGGAGAGCCA TCTGTTCAAG ATCGGATCAT TGTTAACCAC AAACAAGCGC ACTTTCCTCC ACTTGGCTAC GAACCAATAC GGCTCACAAT CTTTACATAT CCTCTTTAGA CGCAGCCCTA GCTTAGACCA TCTCTTATTC CACGCTGTTG GCATAAACTT CTTCTTGCTC ATGACCGATA AGTACGCTCG AGGCTTGATC ATATCCGCTA TACGAGCCGT CGATAAAACC AAGAAGGAGG TTCTCTACAA GCTCACGTAC GAATACACTC TGCAACTTGC CAGAGGCAAA TACAGAGACC TAATCTTCGA GTGCGTCGCC AAGAACGCCG AATGGTTAGC TTTTGACCCC TACGGAACAC ACGTTGTACA GAACTTTCTG ACACTTCAGA ACCCCGTTGC AACAACCGCA ATCGCCGAGA GACTTCGTGG AAATTTCTTC AGTTTAGCGA TGGAGAGACA AGGAAGCTAT GTGGTGGAGA AGTGTTTGAA ATCGGATTTT GCTAGAGGGA AAGTGTTGGA GGAGTTTAGA GGAAATGATA AAGAATGGGT AAGAATGACA ACTGATAAGT TTGGCAACTT TGTGGTACAA TGTGCGTTGA GAGTGATGAA GGAGAAAGAG ATGAGACCAA TGTTGAGAGA GTTTGTGGAG AAGCTAAGGC CTCACTTCTG GAGGATGGAG ATTGGGCATG GGAGGAACAC ACTGAGACTA ATTCAAGAAG AAATTGTGGG TTGGATTAAT CAGTTACCAG ATAAATCTGG ATATATGAAC TAAGTGGTTT TGGTGTTTTT GTT
Length1193
Protein Sequence
Protein Residue
Map Locationscaffold_6: 3656756.. 3657993
Download Sequence
A.thaliana
AGI-codeAT5G09610.1
Descriptionpumilio 21
TAIR curator summaryEncodes a member of the Arabidopsis Pumilio (APUM) proteins containing PUF domain (eight repeats of approximately 36 amino acids each). PUF proteins regulate both mRNA stability and translation through sequence-specific binding to the 3' UTR of target mRNA transcripts.
Alias[APUM21][PUM21][pumilio 21]
Gene coexpression
MR
MR Locus Description
28.775 Ahg949683 F-box and associated interaction domains-containing protein
29.1204 Ahg917658 subtilase 4.13
38.7298 Ahg938233 plastocyanin-like domain-containing protein
40 Ahg901222 homeobox-3
41.7612 Ahg332898 homeobox 53
43.1625 Ahg912682
53.6656 Ahg927998
61.6928 Ahg493441
62.2896 Ahg949069 transposable element gene
63.1664 Ahg483104 LOB domain-containing protein 15
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression