| Annotation |
|---|
| Description | jgi|Araly1|940449|scaffold_600993.1 |
| Sequence |
TTTACTGTTT TGTCGGCAAT ATGAATACTG GTGGTCGGCT CATCGCTGGT TCTCACAACA GGAATGAGTT CGTCTTAATT AATGCAGACG AGAGTGCCAG AATAAGATCA GTGGAAGAGC TAAGTGGGCA AACATGTCAA ATCTGTGGGG ATGAGATTGA GCTGAGTGTT GATGGAGAGT CTTTTGTGGC ATGTAATGAA TGTGCTTTCC CTGTCTGTAG ACCTTGCTAT GAGTATGAGA GACGAGAAGG AAACCAATCT TGTCCTCAGT GCAAAACTCG TTACAAGCGC ATCAAAGGAA GTCCAAGGGT TGAAGGAGAT GAGGAGGATG ATGGAATTGA TGATCTTGAT TTTGAGTTTG ATTTTAGTAG GAGTGGCCTT GAATCTGAAA CTTTCTCTCG CCGCAACTCC GAGTTTGATT TGGCCTCTGC TCCACCTGGC TCACAGATCC CTTTGTTGAC TTATGGAGAG GAGGACGTTG AGATTTCTTC TGATAGTCAT GCTCTCATTG TTTCTCCATC ACCTGGTCAT ATCCATAGGG TTCATCAACC TCATTTTGCT GACCCCGCCG CACATCCAAG ACCAATGGTA CCTCAGAAAG ACCTTGCGGT CTATGGATAT GGAAGTGTTG CGTGGAAGGA TCGTATGGAA GAGTGGAAGA GAAAGCAGAA TGAAAAATAT CAGGTGGTTA AACACGATGG AGATTCTAGT CTTGGAGACG GAGATGATGC TGAAATTCCC ATGATGGATG AGGGAAGGCA GCCTCTGTCT AGGAAAGTAC CAATAAAGTC GAGCAAAATA AATCCGTACA GGATGCTAAT CATTCTCCGT CTTGTGATTC TCGGTCTCTT TTTCCATTAC CGTATTCTTC ACCCCGTCAA TGATGCTTAC GCCTTGTGGC TAATATCCGT GATATGCGAA ATATGGTTTG CGGTTTCATG GGTTCTTGAT CAGTTCCCTA AATGGTATCC TATAGAAAGA GAAACATACT TGGACCGGCT CTCATTGAGG TACGAGAAAG AAGGGAAACC ATCTGAACTA GCTGGTGTGG ATGTTTTTGT GAGTACGGTG GATCCGTTGA AAGAGCCTCC GCTTATTACA GCAAACACTG TTCTGTCTAT TCTTGCGGTT GATTATCCGG TAGACAGGGT TGCTTGTTAT GTATCTGATG ATGGTGCTGC TATGCTTACC TTTGAAGCCC TTTCAGAAAC AGCAGAATTT GCAAGGAAAT GGGTTCCTTT CTGTAAAAAA TACAGTATCG AGCCACGTGC TCCCGAATGG TACTTTTGCC ACAAGATGGA TTATTTAAAG AATAAAGTTC ACCCTGCATT TGTTAGGGAA CGCCGAGCAA TGAAGAGAGA TTATGAAGAA TTCAAGGTTA AGATCAATGC TTTAGTTGCG ACTGCACAGA AAGTGCCTGA AGAAGGTTGG ACTATGCAAG ACGGTACTCC TTGGCCCGGT AACAACGTGC GAGATCATCC TGGCATGATC CAGGTTTTCC TTGGAAATAA TGGTGTTCGC GATGTAGAAA ACAACGAGTT GCCTCGGCTG GTTTATGTTT CTCGTGAGAA GAGACCCGGA TTCGACCATC ACAAGAAGGC TGGAGCCATG AACTCTCTGA TACGAGTTTC TGGAGTTCTA TCAAATGCTC CTTATCTTCT AAATGTCGAT TGTGATCACT ACATCAATAA TAGCAAAGCT CTTAGAGAAG CAATGTGTTT CATGATGGAT CCTCAGTCGG GAAAGAAAAT TTGTTATGTT CAATTCCCTC AAAGATTCGA TGGGATTGAT AAAAGTGACA GATACTCTAA TCGTAATGTT GTATTCTTCG ATATTAATAT GAAAGGTTTG GATGGATTAC AAGGGCCTAT ATACGTTGGA ACCGGGTGTG TTTTTAGGAG ACAAGCACTT TATGGATTTG ATGCGCCAAA AAAGAAGAAG ACTAAGCGTA TGACTTGCAA TTGCTGGCCT AAATGGTGTT TGTTTTGTTG TGGTTTAAGA AAGAATCGTA AGACAAAGAC AACTGATAAG AAAAAGAAGA ACAGGGAAGC CTCAAAGCAG ATACACGCGC TAGAAAATAT TGAAGAGGGC ACCAAAGGCA CTAATAATGC GGTGAAATCA CCAGAGGCGG CACAACTGAA GTTGGAGAAG AAGTTTGGAC AGTCTCCTGT TTTTGTTGCG TCTGCTGGTA TGGAGAATGG TGGGCTTGCT AGGAATGCGA GTCCGGCTTC TCTGCTTAGA GAAGCCATCC AAGTCATTAG TTGTGGATAT GAAGATAAAA CCGAATGGGG AAAAGAGATT GGGTGGATCT ATGGTTCTGT CACCGAGGAC ATCCTTACGG GTTTCAAGAT GCATTCTCAT GGCTGGAGAT CGGTTTACTG TACACCCAAG ATACCGGCTT TTAAAGGATC AGCACCTATC AATCTTTCTG ACCGTCTTCA TCAAGTTCTT CGTTGGGCGC TCGGGTCTGT TGAGATTTTC TTGAGCAGAC ATTGTCCTAT TTGGTATGGT TACGGAGGTG GTTTGAAATG GCTTGAGAGA TTGTCTTACA TCAACTCTGT GGTTTATCCA TGGACCTCTA TTCCACTCCT CGTTTACTGT TCTCTCCCTG CTATCTGTCT TCTCACCGGA AAATTCATCG TCCCCGAGAT TAGCAACTAT GCAAGTATCC TCTTCATGGC ACTTTTCGGG TCGATTGCTG TAACGGGCAT TCTCGAGATG CAATGGGGTA AAGTAGGGAT TGATGATTGG TGGAGAAACG AACAGTTTTG GGTGATTGGA GGTGTTTCAG CTCATCTCTT TGCTCTCTTC CAAGGTCTCC TCAAGGTTTT AGCCGGTGTC GACACAAACT TCACGGTCAC ATCTAAAGCA GCTGATGATG GTGAATTCTC TGACCTTTAC ATCTTCAAAT GGACTTCACT CTTGATCCCT CCGACCACAC TCCTCATCAT AAACGTAATC GGAGTCATAG TCGGAATCTC TGATGCGATC AGTAACGGAT ATGACTCTTG GGGACCGCTT TTCGGGAGAT TGTTCTTTGC GTTTTGGGTC ATCCTCCATC TATATCCTTT CCTTAAAGGT CTGCTTGGGA AACAAGACAG AATGCCAACA ATCATTCTTG TCTGGTCGAT CCTTCTCGCC TCTATCCTTA CGCTCCTTTG GGTCCGAGTC AATCCGTTTG TGGCGAAAGG CGGTCCTATC CTCGAGATCT GCGGTTTGGA CTGCCTTTGA TTGAACTCAG AGTTGATGTG |
| Length | 3250 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_6: 3745140.. 3749786 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT5G09870.1 |
| Description | cellulose synthase 5 |
| TAIR curator summary | Encodes a cellulose synthase isomer, related to CESA6. As inferred from the null role of secondary wall-type CesAs, included in a set of five primary wall-type CesAs that may support trichome cell wall thickening. |
| Alias | [CESA5][MUM3][cellulose synthase 5][MUCILAGE-MODIFIED 3] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 2.44949 |
Ahg485280 | Plant invertase/pectin methylesterase inhibitor superfamily |
| 5.19615 |
Ahg497154 | FASCICLIN-like arabinogalactan 2 |
| 10.4881 |
Ahg926953 | glycosyl hydrolase 9B7 |
| 11.4891 |
Ahg487077 | IQ-domain 2 |
| 12.5698 |
Ahg484602 | Cellulose-synthase-like C4 |
| 12.6491 |
Ahg496689 | cellulose synthase 6 |
| 14.7648 |
Ahg483883 | squamosa promoter binding protein-like 1 |
| 15.3623 |
Ahg924488 | glycosyl hydrolase 9C2 |
| 15.4919 |
Ahg934322 | methionine adenosyltransferase 3 |
| 16.4012 |
Ahg931262 | Leucine-rich repeat (LRR) family protein |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|