Detail



ID : Ahg485280

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|485280|fgenesh2_kg.5__1272__AT3G49220.1
Sequence
AATGTAAATC AAAAGAGAAC TAAACCAAGA AACAAAAATG GGATACGAAA GGCTCGGACC ATCTGGAGCA ACTGGTTCGG TCCCAATCTC CACTACTACA GCTCCGATCC TAAACCAAGT CTCCACGTCA TCACAACCGG AGAACAACAA CCGGAGAAGC AAAAAGAAGC TTGTAGTGTC ATCAATCGTC TTAGCCATCT CACTTATCCT CGCCGCCGCG ATCTTCGCCG GAGTCAGATC ACGTCTCAAG TTAAACCAAT CTGTTCCAGG CCTAGCTCGT AAACCAAGCC AAGCAATCTC TAAAGCTTGT GGGTTAACTC GTTTCCCCGA GTTATGCGTT GACTCACTCA TGGACTTTCC CGGCTCACTC GCCGCTTCCT CCTCCAAAGA TCTGATCCAC GTGACGGTTA ACATGACGCT CCACCACTTC AGTCGCGCTC TCTACTCCTC TGCTTCCCTC TCCTTCGTCG ACATGCCGCC ACGTGCTCGC TCAGCTTACG ACTCTTGCGT CGAGCTACTA GATGATTCCG TCGACGCGCT CTCACGCGCT CTCTCCTCCG TCGTATCGTC CTCGGCCAAG CCACAAGACG TTACCACGTG GCTTAGCGCG GCTTTAACGA ACCATGACAC GTGCACTGAA GGATTCGACG GCGTCGACGA CGGTGGAGTG AAGGATCATA TGACAGCGGC GATAAAGAAT CTTTCTGAGC TTGTTAGTAA CTGTCTTGCT ATATTCTCGG CGAGCCACGA CGGTGACGAT TTCGCCGGAG TTCCGATACA GAACAGGAGA CTGTTGGGAG TGGAGGAACG AGAAGAGAAA TTCCCGAGAT GGATGAGGCC AAGAGAACGC GAGATATTGG AAATGCCGGT ATCTCAGATA CAAGCTGATA TTATCGTCTC GAAAGACGGC AACGGCACGT GCAAAACTAT ATCGGAAGCT ATCAAGAAAG CTCCTCAGAA CAGTACTCGC CGGATAATTA TCTATGTCAA GGCCGGAAGG TATGAAGAGA ACAACCTCAA GGTCGGTAGG AAAAAAATAA ATTTGATGTT CGTTGGAGAT GGGAAGGGTA AAACTGTCAT TTCGGGAGGG AAAAGTATAT TTGACAACAT CACTACTTTC CACACGGCGT CATTTGCTGC GACCGGAGCT GGATTTATTG CAAGGGACAT CACATTCGAA AATTGGGCTG GTCCAGCGAA GCACCAAGCG GTGGCTCTCC GTATTGGGGC TGACCACGCA GTGATCTACC GATGCAATAT AATCGGTTAC CAAGACACAC TTTACGTTCA TTCAAACCGT CAATTCTTTC GTGAATGCGA TATCTACGGT ACAGTCGATT TTATCTTTGG TAATGCAGCC GTCGTACTAC AAAACTGTAG CATCTACGCA CGAAAGCCCA TGGATTTTCA GAAAAATACA ATCACGGCTC AAAACAGAAA AGATCCGAAC CAAAACACCG GAATATCGAT ACATGCGTCT AGGGTTCTTG CAGCATCCGA TCTCCAAGCG ACAAACGGTA GTACCCAGAC GTATCTAGGC CGACCTTGGA AGCTATTCTC TAGGACGGTG TATATGATGT CGTATATCGG TGGTCATGTA CACACGAGAG GTTGGCTCGA GTGGAACACA ACATTTGCTT TAGATACGTT ATATTACGGA GAGTATTTGA ACAGTGGACC GGGGTCAGGT CTCGGGCAAC GTGTGACCTG GCCGGGGTAT CGGGTCATCA ATTCGACGGC CGAGGCTAAC CGGTTCACGG TGGCTGAATT TATATACGGT TCGTCGTGGT TGCCTTCGAC CGGAGTTTCG TTCTTGGCCG GATTAAGCAT ATAGGTAGAG GGAAAAATGA AATGCTTATG TTTCCGATGA ATTGTTTCAT TCTTACGGTC CTTATAATAA TGGACATATC ATTAATCCTA TATATATGAG TATATTTTAA CTTTTAATTG TACTATCTCC A 
Length1961
Protein Sequence
Protein Residue
A.thaliana
AGI-codeAT3G49220.1
DescriptionPlant invertase/pectin methylesterase inhibitor superfamily
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
2.44949 Ahg940449 cellulose synthase 5
11.0905 Ahg496689 cellulose synthase 6
15.9374 Ahg335233 Plant protein of unknown function (DUF869)
19.799 Ahg470596 Chitinase family protein
24.8998 Ahg487077 IQ-domain 2
26.1534 Ahg479405 NAD(P)-binding Rossmann-fold superfamily protein
29.189 Ahg483311 Rhodanese/Cell cycle control phosphatase superfamily protein
30.7409 Ahg496502 Pectin lyase-like superfamily protein
33.4066 Ahg926953 glycosyl hydrolase 9B7
35.7911 Ahg949817 Protein of unknown function (DUF819)
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression