Detail



ID : Ahg940514

Blast(Query) A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|940514|scaffold_601058.1
Sequence
GTTCTGTTTC TGTCAATAGT GATGTGTTAT CTAAAATGTA AACAGGATGG TGCTTCAAGA GGAGCAAATT CTAAGCGTGT TGCTCCTTCT GATTCGTTCG ATGATGAGAC ATGCTCTGTT GGATCAAAGG CTCATTGTGC AGATGATTTG TCTAAATTAG CATCCAGCAC TGCAGCTTCA CATGAAGCAA AAAATGAATG TGAAATTCCA TATATACGTA GCTTAGAACC ACCAACAAGA GAAATGGCAG AGACTGGAAC GATAAAGAAC GAGACATTGC CTTCCCGTTT TCCCACCTTT CATGCAAGTG AACAAGGTCC ATGGTCTGCA ATGATTTCCT ATGAAGCCTG TGTACGGCTA TGTCTTCATT CATGGGAAAC AGACAGTGTC ACCGAGGCTT CGTACTTCCT CAATGATGAT TGCACGTTAA TCCGAAATGC ATTTGGTTTG CAGAATTTCT TCCTTCAATC TGAAGAAGAA CTGTTGGGAA ATAGACCTTC TAGCTTGGTT ACTGAGGCAA CTGCTCCAAA ATTCAAGAGA AGTGTTGGAA AAATCAAACT CCAAGTGTGT AGCTCAACAG TTGGTAGGAT CAAAATGGGA TTAGATCAAC AACCTGGTTG CAATATTTCA TCACTGAAGC ATGAAATCGT TCGCCAGCAA ATCGCGGAGC TGAATTCTGC TTTGTCTTCT GGATGGAAAG CAGTAAAGAG AGTTCATGTC TCTCCTCCAG TTCCTTTGAA TGGTTCACTT TCACGGAAAA GTTTGGCATA TATGCGCGCA TGTGCTCACT ACCTTAAACA GGTATCAAAA GTCCTTAAAA AAGAATTTGT TACATCTCAC ACCGGACCTC GCTCTCTCAA AGCATTACAA GAAACTTTTA CATGTTCATT AAGACTAAAG AGCTCTGCCG AGGAGGATCA AGTTAAAACA CTACCTGGAT CTGGCGAAAC ATTTGTCTTC TTACCAGATA GTATCGGTGA TGATTTGATT GTTGAAGTTC GGGATTCAAA GGGGCAGTTT TGTGGTCGTG TCTTAGCTCA ACTAGCAGCT ATAGTTGATG AACCGAACGA TCATAAATGG TGGGCAATAT ATCATGAACC AGAGCATGAC CGTATTGGGA GAATCCAACT TCATATAAAC TACTCAAGCA GCTTAGATGA AAAAACTAAG TGTGGGTTGG TTGCAGAAAC TTCAGCTTAT GACTTGGTTT TGGAAGTGGC TATGAAAGCT GAGCAATTTC AGCGCCAAAA TCTGTTAATT AAAGGGCCAT GGCACTGGAT GGTAACTCGA TTTGCATCCT ATTACGGAAT TTCGGATGCA TATACAAAAT TAAGATATCT TTCATATGTC ATGGATGTTG CCTCGCCTAC TAAGGACTGT CTTGATCTGA TATATGATTT TCTGTCGCCT GTTTTAATGA AAGGCAATCA CAAGGCTGTA TTGAGTCATC AAGAGAATCG CTTGCTTGGG GAGATTGATG AACAAGTTCA GCAGATTCTT GCTCTGACAT TCGAGAATTA TAAATCTCTT GATGAATCTT CTTTATCTGG AATCAAAGAT GTTTTTGAGC CTCCTACAGG AATTCCAGCG CCTGCTATAG CGCCAGCTAT CAAGCTTTAT GGTCTTCTCA ATGACGTGTT AAGCCCTGAG GCACAACTAA GACTTTTCAG ATACTTTCAG ACTGCTTCAA AGAAGAGGTC AAGAAGATAC TTATTGGAAA CGAACAATAT ACTTCACAAT CATATTGAGC ATGCACAAGG CACTTCTTAT CAGAGGATGA AGTCTTTAAT TTTGAGCCTT AAGAGTGAAA TCTCAACTGA TATAGCCATC CGTAACTACA ATGTGCTCCC AAGCTTTATA GACCTTCCAA AACTTTCGGC GGCAATATAT AGTGTGGATC TATTCAACAG ACTAAGGGAA TATCTTATTG CATGGCCCCC TCCTTCTGCA ACGCCTCCAG TTGTCGAGCT TATCATTACG ACAGCTGACT TTGAAGCCGA TCTCTCTCGC TGGAATATAA ATCCAATCAA AGGTGGTGTT ACTGCCAAAG AGCTTTTTCA TTCATATATT ACTACTTGGA TCGAAGAGAG AAGATGTTAT CTATATGAGT TCTGCAAGTC AGAAACGGCA AAATCATGTA GTGAGATTCA AGGCTTGACC TCTCCTTTAG TTGATGAGAT GTATGAGTTA CTCAACGCGA CACTTGATGA GTATGATATC ATCATCAGGC GTTGGCCCGA ATATGCGGCA TCCTTGGAGA AACTTGTAGC CGATGTGGAG AGGTCTATTA TTGAAGCATT GGAGAAGCAA TTTTCGGAAG TTTTGTCTCC GTTGAAGGAA AGCAAGGTAT CTCCCCTGAA GTACGTCCAG AGATTGACAA AAACGGGCCA ATCTAATCTC TATGCTGTTC CAAAAGAACT TGGAGTTCTT TTAAATTCCA TGAAAAGAGT GCTTGACACA TTACGGTCAA GTATAGAAAA TCGGTTCAAA GTGTGGAACT CTTATCTTCC TGACAAAGAA AAGAGAGTTT TGGGAGAGCA GCTGAGCGAA GTGACTGTAC AGCTAAGAGC CAAATTCAGA AGTTACATGC AAGCGCTCGT GGAGAAACTT GCAGAGAATA CGAGGATACA AAGCCACATG AGAATGAAGA ACATCATCCA CGACTTACAG GAAACAACAG CAGAACCAGA CGTTAGAAAC AGAATGCAGA GTTTGAAAGA TTTACTAGAC AAGACCATTG ATCATCTGCA TTGTGTTTTG TCACTCGATG TGTTTGTATT AATATGCAGA GGAATATGGG ACAGACTGGG ACAGGATGTT CTGCGGCTTT TGGAAGACAG AAGAGACAAG GTGACTTGGT ACAAAGGCCC GAGGATCGCA GTTTCTGTTC TAGATGAGAT ATTTGTGACT CAAATGCAAA GCTTACTCGG GAATTCGTTA AAGGAAGAGA ATTTGGAGGC ACCAAGATCG ATGATTGAGC TTCGATCTAT GCTTGTGTAA AGATTCAGAT CATGAGAACA CTACTGA 
Length3027
Protein Sequence
Protein Residue
Map Locationscaffold_6: 4005057.. 4009780
Download Sequence
A.thaliana
AGI-codeAT5G65440.3
Description
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
18.412 Ahg952206 indole-3-acetic acid inducible 2
31.5278 Ahg352314 Copper amine oxidase family protein
31.7648 Ahg344726
57.55 Ahg492324 Fe superoxide dismutase 1
64.6684 Ahg941495 nudix hydrolase homolog 24
64.8614 Ahg492103 Protein of unknown function, DUF584
66.5432 Ahg932721
68.5274 Ahg919779 branched-chain amino acid transaminase 2
74.0945 Ahg928580 non-intrinsic ABC protein 4
96.4883 Ahg921555 FBD, F-box and Leucine Rich Repeat domains containing protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression