| Annotation |
|---|
| Description | jgi|Araly1|940517|scaffold_601061.1 |
| Sequence |
TCTTTCTCGC TTAGTCACTT TCCATGGCGG GCTTTCTCTC CGTCGTCCGG CGCGTATACC TCACACTCTA CAATTGGATC GTCTTTGCTG GATGGGCTCA GGTTTTGTAC TTAGCGATAA CGACGTTGAA GGAAACGGGA TATGAAAATG TGTATGACGC CATTGAGAAG CCTCTCCAGC TTGCTCAGAC TGCCGCCGTT CTCGAGATTC TTCATGGATT AGTAGGTTTG GTCAGATCTC CTGTTTCTGC AACTCTGCCA CAGATAGGTT CAAGGCTATT TCTCACTTGG GGAATCCTAT ACAGTTTTCC AGAGGTCCGA TCTCATTTTC TTGTTACGTC CCTGGTCATA AGCTGGTCTA TCACGGAGAT TATTCGCTAC TCCTTCTTTG GCTTTAAGGA AGCTCTAGGC TTTGCGCCTT CATGGCACTT GTGGCTCAGA TATAGCAGCT TTTTGTTGCT ATACCCTACC GGTATCACCA GTGAAGTTGG TCTTATCTAC CTTGCCTTAC CACACATCAA GACATCGGAG ATGTACAGCG TGAGGATGCC TAACACATTG AACTTCTCAT TCGACTTCTT CTATGCAACG ATACTTGTCC TTGCAATCTA TGTCCCAGGT AGTCCACACA TGTACAGGTA CATGCTTGGT CAGCGAAAGA GAGCTCTCTC CAAATCCAAG AGGGAATAAA AAAAGCTTTA GAAAGAGAC |
| Length | 709 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_6: 4020753.. 4022662 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT5G10480.3 |
| Description | Protein-tyrosine phosphatase-like, PTPLA |
| TAIR curator summary | Protein tyrosine phosphatase-like involved in cell division and differentiation. Interacts with CDKA;1 only in its phosphorylated form, preventing dephosphorylation. Overexpression slowed down cell division in suspension cell cultures at the G2-to-M transition and early mitosis and inhibited Arabidopsis seedling growth. Localized in the cytoplasm of dividing cells but moved into the nucleus upon cell differentiation. Based on complementation of yeast mutant PAS2 has acyl-CoA dehydratase activity. It interacts with CER10, a component of the microsomal fatty acid elongase complex, suggesting a role in synthesis of VLCFAs (very long chain fatty acids). |
| Alias | [PAS2][PEP][PASTICCINO 2][PEPINO] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 27.8388 |
Ahg481930 | catalytics;transferases;[acyl-carrier-protein] S-malonyltransferases;binding |
| 28.3373 |
Ahg495659 | FASCICLIN-like arabinogalactan 1 |
| 30.1662 |
Ahg948939 | sterol carrier protein 2 |
| 37.0675 |
Ahg482197 | glycine-rich protein 23 |
| 37.3095 |
Ahg494383 | GDSL-like Lipase/Acylhydrolase superfamily protein |
| 40.2989 |
Ahg491950 | expansin B3 |
| 43.6578 |
Ahg334850 | |
| 43.9886 |
Ahg473232 | |
| 45.3652 |
Ahg473173 | Metallo-hydrolase/oxidoreductase superfamily protein |
| 48.4768 |
Ahg900167 | 3-ketoacyl-CoA synthase 10 |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|