Detail



ID : Ahg940677

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|940677|scaffold_601221.1
Sequence
CCGAGTAAGA CCGATCATCG ATGGCTGAGG CAATGGCACA GAATCTTCTT CAAGACAACC AGCTTAACCG GACTTCCTTC CATTTCCAAC CTCAGAGAAA TTGGCTCAAC GATCCAAACG CGCCAATGTA CTACAAAGGA TTCTACCATT TGTTCTACCA GCACAACCCT TTGGCTCCTG ATTTCAGTAA AATAATGATA TGGGGGCACT CTGTTTCACA AGATATGGTC AACTGGATCC AACTTGAACC AGCCCTTTCT CCTTCTGAGC CCTTTGACAT CAACAGCTGC TGGTCAGGAT CCGCCACGAT CCTCCCCGAT GGCAGACCTG TAATTTTGTA CACCGGACTC GACGATAACA ACAAACAGCA AGTCACAGTT GTTGCCGAAC CAAAGGACGT TTCTGACCCT TTGCTTCGTG AGTGGGTTAA GCCAAAGTAC AATCCTGTGA TGGTTCCGCC AAGTAATGTC CCTTTTAATT GTTTCCGTGA CCCAACGACG GCGTGGCAAG GGCAAGATGG GAAATGGAGA GTGCTCATAG GAGCTAAGGA GAAAGATACT GAGAAAGGAA TGGCTATTTT GTACCGAAGC GATGATTTTG TCCAGTGGAC AAAGTATACA GTGCCTTTAC TTGAGTCAGA AGGAACCGGA ATGTGGGAAT GCCCTGATTT TTTCCCGGTT TCTGTCACTG GTAAAGAAGG TGTTGAGACT TCAGTGAACA ATGCTACTGT GAGGCATGTC GTGAAGGCGA GTTTTGGAGG CAATGATTGC TATGTCATTG GAAAATACTC TTCTGAGAAT GAAGAATTTT CAGCGGATTA TGAGTTCACT AACACTAGTG CGGATTTGAG ATATGATTAT GGAAAGTTTT ATGCCTCGAA GGCGTTCTTC GATAGTGTTA AAAATCGGAG GATCAACTGG GGATGGGTCA TAGAGACTGA TAGCAAAGAA GATGATTTTA AGAAAGGATG GGCTGGCCTT ATGTCTCTTC CCAGGGAAAT GTGGCTGGAC ACAAATGGAA AGAAGCTGAT ACAATGGCCA ATTGAAGAAA TCAACAATCT CCGGACCAAA AGTGTTAGCC TTGATTGCTA TGAATTCGAA ACCGGCTCGA CCTTCGAAAT TTCAGGCATC ACTGCTGCCC AAGCCGACGT AGAGGTGACT TTTAATCTGC CTTTCCTGGA CGATTATCCC GAGATACTTG ATGCTGACCA AGTTGATGAT GCGACTCTGT TTGATCATGA CAACTCGGAT GGATGTGTTT ACGGGCCTTT TGGACTGCTA GCATTGGCTA CCAATGATTT ATCAGAACAA ACCGCAATCT TCTTTAAAGT TATTCGTCGC GGAAACGGAT ATGCAGTTGT AATGGGCAGC AGCGAGAAGA GGTCTTCGTT GAGAGACAAC ATAAAAAAAT CTTCGCATGG AACATTCCTA GATATTGATC CAAGGCATGA GAAGATCTCA TTAAGATGTT TGATCGATCA CTCGATTATA GAGAGCTACG GAGCAGGAGG AAAAAGTGTG ATAACATCTA GGGTTTATCC AAAATTGGCA ATTGGCGAAG CAGCTAAGCT GTATGTGTTC AATGATGGAG AAAAGGGTGT GATCATGACG TCCCTGGAAG CTTGGAGCAT GAGAAATGCC CAAATCAATT CAAACCCAAC TTATTAATGA ATCATATAAT ATTGATA 
Length1687
Protein Sequence
Protein Residue
Map Locationscaffold_6: 4642423.. 4645020
Download Sequence
A.thaliana
AGI-codeAT5G11920.1
Description6-&1-fructan exohydrolase
TAIR curator summaryEncodes a protein with fructan exohydrolase (FEH) activity acting on both inulin and levan-type fructans (1- and 6-FEH). The enzyme does not have invertase activity.
Alias[AtcwINV6][cwINV6][6-&1-fructan exohydrolase]
Gene coexpression
MR
MR Locus Description
2.44949 Ahg485057 Subtilase family protein
4.89898 Ahg947028
10 Ahg475168 Protein kinase superfamily protein
10.8167 Ahg916643 Maternally expressed gene (MEG) family protein
14.2829 Ahg927040
25.6905 Ahg900923 myb domain protein 14
27.1293 Ahg933018
27.2029 Ahg325975 Peroxidase superfamily protein
27.8209 Ahg951775
29.5804 Ahg485459 other RNA
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression