Detail



ID : Ahg941020

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|941020|scaffold_601564.1
Sequence
AGCTTTTTGA TCATAATCTT ATGAAATGCT TATCCTACCA AAATGTTCGT CTCCTTCTCC GACAGAGCGC TCACCGTTCG TTTCTCCATC CCGGCAGGGA ATTGCACGCT GTTTTAACCA CTTCTGGATT GAAGAAAGCT CCGAGGTCGT ACCTCAGCAA CGCGCTCTTT CAGTTTTATG CATCCTCTGG TGAAATAGCT ACTGCCCAGA AACTGTTCGA CGAAATTCCT CTGTCAGATA AAGACAATGT GGACTGGACA ACTTTGTTAT CCTCTTTTTC CCGGTTTGGA TTGTTGGTTA ATTCGATGAA GCTCTTCGTG GAAATGAGAA GGAAAAGAGT AGAGATTGAT GATGTTTCTT TAGTCTGCTT GTTTGGCGTG TGTGCCAAGC TCGAAGATCT GAGGTTCGGT GAACAAGGGC ATGGGGTTGC TGTAAAGATG GGATTTTTGA CTAGTGTAAA GGTTTGTAAT GCCTTAATGG ATATGTATGG GAAATGTGGG TTTGTGAGTG AAGTCAAACG CATTTTCCAG GCGTTAGAGG AGAAGAGCGT TGTTTCATGG ACGGTGGTTT TGGACACTCT TGTGAAATGG GAGGGGTTGA AGAGAGGAAG AGAGGTTTTT GACGAAATGC CTGAGAGAAA TGTTGTTGCT TGGACGCTTA TGGTTGCTGG GTATTTGGGA GCTGGGTTTA CAAGGGAAGT ATTGGAGCTT CTGGCAGAGA TGGTGTTTAG ATGTGGGCAT GGTTTGAACT TTGTCACCCT TTGCTCGATG CTATCGGCTT GTGCACAATC GGGAAACCTG GTAATTGGTA GATGGGTTCA TGTGTATGCA CTGAAAAAGG CAATGATGAT GGGGGAGGAA GAAACTTATG ATGGTGTTAT GGTGGGAACG GCATTGGTTG ATATGTATGC TAAATGTGGA AACATAGATT CTTCCATTAA AGTCTTCAGA TTGATGCTTA AGAGAAATGT GGTGACATGG AATGCTTTGT TCAGCGGGTT AGCAATGCAC GGGAAAGGTA GAATGGTGAT TGACATGTTC CCAGAGATGG TAAGAGAGGT GAAGCCGGAT GACTTAACCT TCACTGCTGT CTTAAGTGCT TGCAGCCACT TGGGGATGGT AGATGAAGGG TGGCGATGTT TCCACAGCCT CCAGTTCTAT GGTTTGGAAC CTAAGGTTGA CCATTATGCA TGTATGGTAG ATATATTGGG GCGAGCTGGT CGTATTGAAG AAGCAGAGAT ATTGATGAGG GAAATGCCAG TGCCTCCGAA TGAAGTTGTC CTTGGTTCGC TTCTAGGCTC GTGTAGTGTC CATGGAAAGC TGGAGATAGC CGAACGAATT AAAAGAGAGC TTATTCAGAT GAGTCCAGGC AACACAGAGT ACCAAATACT TATGTCAAAC ATGTATGTTG CAGAAGGAAG GAGTGACATT GCTGATGGGT TAAGGGGAAG TCTGAGAAAC CGAGGCATCA GAAAAATACC TGGTTTGAGT TCCATTTACG TTAATGACTC AGTACATCGG TTTAGTTCAG GAGATCGATC CCACCCGAGA ACGAAAGAGG TCTACTTGAA GTTGAATGAA GTGATTGAAC GGATAAGATC AGCTGGTTAT GTCCCTGATA TCTCTGGCCT GGTTTCTCCT TCGGAGGGTG ACTTGGAGGA AAAAGAGCAA GCTTTGTGCT GTCACAGTGA GAAACTGGCT GTCTGTTTCG GGCTTCTGGA AACAAAACCG AGGACACCTC TTCTTGTCTT CAAGAATCTG AGGATATGTC GGGATTGTCA TTCGGCTATG AAGATTGTTT CAAAGGTCTA TGACCGAGAA ATCATCATCA GAGACAGAAA TAGATTTCAT CAGTTCAAGG GAGGCTCTTG TTCTTGTTCC GATTATTGGT GAACAGATCA AACGGCTGAA CG 
Length1912
Protein Sequence
Protein Residue
Map Locationscaffold_6: 6003522.. 6005434
Download Sequence
A.thaliana
AGI-codeAT5G15340.1
DescriptionPentatricopeptide repeat (PPR) superfamily protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
39.6106 Ahg487420 sucrose-proton symporter 7
76.642 Ahg917658 subtilase 4.13
79.3725 Ahg472260 Haloacid dehalogenase-like hydrolase (HAD) superfamily protein
80.666 Ahg496519
95.7497 Ahg339169 Tetratricopeptide repeat (TPR)-like superfamily protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression