Detail



ID : Ahg941048

Blast(Query) A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|941048|scaffold_601592.1
Sequence
TTTATTAGTG ACGTTGAAGG ATGGCAATGG ACATGTGCAA ATCTTCCCTT TTTCATGTTT TCACACTCTC TCTCACTTCT CTCTCCAATT CTCTCATCAA TCTCCGCAAA CTGTTCTCAT TCATCTCTAG CCCCAATCTG ATAATCAAAT CCATCTTTCA ATCTCTCACA CGGAGAAGTC CCAAACCTTC CTCTACGACG GCGGCGCTTC CACCGCGCTC TTCCTCCTCC TCCGCCGCCG ACGCTTCAAC TGAGGTTCGT CGGAACCGCT ACAAAGTAGC GGTGGATGCA GAAGAAGGAA GACGGAGAAG AGAGGACAAC ATGGTTGAGA AAAGTAAGCG TGAAGAAAGC TTACTTTTAG AATTGGGGAG TTTGCCTTCA ATGGTTGGTG GTGTTTGGTC AGATGATAGA AGTTTACAGC TTGAAGCAAC TACTCAGTTC CGGAAGTTGC TTTCTATTGA GTGTAATCCT CCGATTGAAG AGGTGATTCA AGCTGGTGTT GTGCCTCGGT TTGTGGAATT TCTCACGAGA GAGGATTATC CACAGCTTCA GCATTACATG GAGAGTTTCA CGACGTATAT AGTAAACCTG TTGAAAAAAG AGAAGCTTTT CGCACCACAG GGCGGTCCAA TTATCTTGTC TCAGGCAAGA CAAATGACAA CATATAAAAT TTCAGCATCG TTTTGTTTCT TTTTAGAATG TTTTTCTTGA TATTGTGATT CATTAGGTGG 
Length730
Protein Sequence
Protein Residue
Map Locationscaffold_1: 22501995.. 22502763
Download Sequence
A.thaliana
AGI-codeAT4G16143.1
Descriptionimportin alpha isoform 2
TAIR curator summaryProtein interacts with Agrobacterium proteins VirD2 and VirE2. Is not individually essential for Agrobacterium-mediated root transformation, but when overexpressed can rescue the impa-4 decreased transformation susceptibility phenotype.
Alias[IMPA-2][importin alpha isoform 2]
Gene coexpression
MR
MR Locus Description
40.8044 Ahg897864
45.2659 Ahg897210
68.4251 Ahg921207
99.0303 Ahg934807
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression