Detail



ID : Ahg941079

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|941079|scaffold_601623.1
Sequence
CCATTGTCTT GAAGCAGACG ATGGAGCTTC CTTTGTTTGC AATCCTTCAA AGAACACCAA AAGTTGCAGT TACATTAGCA TTTGTTCTAT TTCTCTTCAC AATAGTCTAT GCTTTTTATA TTCTCTCCTG GCCAATCCAA TCTTACCTCC ATCAATCTCA TCATCCGAGG CTGACAATCC CCCTGCAACC ACTCATACAA ACTTCTTCAG ACTATACCTT GACGAGTATG ACACCGAGTG GACAAGTCAG CTTGACCAGC TTGACTATAT CATCCGGCCA CTGGTTTTAC CGGCCGGTTA TGTTTTATGA AAACCAACAA ATCTCTGGGT GGTCTGGCAT TTTCGCGGAG TTTTTCTCCT CAAAAGGTGA CCCTTGGAAC GAAGGAGGGG ACTCTGTAGG GACACAACCT TACAGACGAA ACGAAACAAT TTCCGAAGGT GCGGATCTCA AGGTTCACGA CATTCAACTG AAGGAATTTA GAGCTTCAGA AGAAGATGGG AGGGAGAAGA GTGGTTTGAG ACTGAAGTTA ATGGACACCA CACAGGCAAT GCTATTGCTA CCAGATGGGC ATCCTGGGAG ATATGGCCAT CTACAGAATG CAAATGTGAC TTTAAGAAAT GACTGTATTC ATTGGTTCCT GCCTGGACCT ATCGATACTT GGAATGATAT ATTGCTACAA ATGATGAAGA CAGAGAACTA GAAAGCATCC CTCAAGAATG AGT 
Length723
Protein Sequence
Protein Residue
Map Locationscaffold_6: 6209149.. 6209950
Download Sequence
A.thaliana
AGI-codeAT5G15890.1
DescriptionTRICHOME BIREFRINGENCE-LIKE 21
TAIR curator summaryEncodes a member of the TBL (TRICHOME BIREFRINGENCE-LIKE) gene family containing a plant-specific DUF231 (domain of unknown function) domain. TBL gene family has 46 members, two of which (TBR/AT5G06700 and TBL3/AT5G01360) have been shown to be involved in the synthesis and deposition of secondary wall cellulose, presumably by influencing the esterification state of pectic polymers. A nomenclature for this gene family has been proposed (Volker Bischoff & Wolf Scheible, 2010, personal communication).
Alias[TBL21][TRICHOME BIREFRINGENCE-LIKE 21]
Gene coexpression
MR
MR Locus Description
7.14143 Ahg913086
11.5326 Ahg475466 Protein of unknown function (DUF784)
15.5563 Ahg333398 F-box and associated interaction domains-containing protein
15.6525 Ahg897389
15.6525 Ahg936403
15.6525 Ahg321472
19.799 Ahg908156
21.0238 Ahg321132 Cysteine proteinases superfamily protein
23.2379 Ahg943726
25.6905 Ahg926450
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression