Detail



ID : Ahg941587

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|941587|scaffold_602131.1
Sequence
TAGAAAAAAG TTTCATCATC ATGTTCTATT CGACTAAGAA GCTATTCTTG TTCTTCTTCT TGTGCATTGT GCTGATTGTC AACTACAACA ACAATGGTTT CGTAACCGCA GTAAATAGCA TTGGCTTGAA CTATGGTCTC CTCGGAGATA ACCTCCCGTC TCCGTCCAAT GTTATAAACC TTTACAAGTC CATAGACATT ACTAAAATCC GAATCTTCGA CCCGAACACT GAAGTTCTTA ACGCTTTACG CGGCCACCGT GATATTGCAG TCACTGTAGG CGTTAGGGAC CAGGACTTGG CTGCTCTTGC AGCTAGCGAA GAAGCTGTTA AGGGCTGGTT TGCGACCAAC ATCGAGCCTT ACTTACCCGA CGTCAACATC GCGTTCATTA CTGTTGGTAA TGAAGTCATC CCTGGACCAA TTGGTTCTCA AGTGCTTCCC GTCATGCAGT CTCTCACCAA CCTGGTCAGG TCAAGGAATC TTCCAATCTC GATAAGCACT GTGGTGGCTA TGTGGAACCT CGAGCAATCG TACCCACCTT CCGCAGGAAT GTTCACGTCT CAAGCGCGTG AACAACTTGT TCCCGTGCTG AAACTATTGT CTCAAACAAA TACGCCCATT CTCGTAAATA TTTACCCTTA CTTCCCTTAT GTGTCCGACC CAGCGAGCAT CCCTCTCGAC TATGCCACCT TCAATACTGA GGCCATCGTG GTACAAGATG GACCACTGGG CTATTCAAAC ATGTTTGATT CAATATTTGA CGCTTTCGTG TGGGCAATGG AGAAGGAAGG CGTTAAAGAT TTACCAATGG TGGTGTCCGA GACCGGATGG CCATCTGCTG GGAATGGAAA CTTTACCACG CCGGATATCG CAGGTACCTA CAACAGAAAT TTTGTGAAAC ATATAACAAG CGGAAAAGGG ACGCCCAAGA AGCCCAACAA GGGCATCGAC GTGTTTTTGT TTGCAACATT TAATGAAAAT CAGAAGCCGG CAGGGACTGA ACAAAATTTT GGGTTGTACA ATCCAAATGA TATGAAGCCC ATCTACAAGC TATTCTAAGT GTGAAAGTTT TTTGGACTTT 
Length1080
Protein Sequence
Protein Residue
Map Locationscaffold_6: 8210612.. 8211678
Download Sequence
A.thaliana
AGI-codeAT5G20340.1
Descriptionbeta-1,3-glucanase 5
TAIR curator summaryEncodes a putative beta 1,3-glucanase.
Alias[BG5][beta-1,3-glucanase 5]
Gene coexpression
MR
MR Locus Description
3.31662 Ahg897183 Polynucleotidyl transferase, ribonuclease H-like superfamily protein
4.89898 Ahg897485
7.68115 Ahg337776 plant glycogenin-like starch initiation protein 4
8.3666 Ahg479371 AGAMOUS-like 103
8.544 Ahg322562 phloem protein 2-B2
9.16515 Ahg913138 Glycosyl hydrolase superfamily protein
9.59166 Ahg478601 Polynucleotidyl transferase, ribonuclease H-like superfamily protein
11.9164 Ahg945851
13.4164 Ahg897391 ferric reductase-like transmembrane component family protein
13.8564 Ahg943784
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression