Detail



ID : Ahg941857

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|941857|scaffold_602401.1
Sequence
TATTTCTTGA TTTAATTATA ATGACAGAGA TCTTCAGTGA CACTGGCATC AGACAGTTAT CCCAAATGCT ACTATCACTT ATCTTCTTCC ACACATCCGA ATACATTCTA GCCATCGCCA TTCATGAAGC ATCAAACGTA ACTCTTAGCT CGCTTTTGAT CAGTAAGCAT TACGCTTTAG CAATGCTTGT GTCGCTGCTC GAATACCTTA CAGAGATTAT CCTCTTTCCT GGGCTGAAAC AACATTGGTG GGTCAGCAAC TTTGGACTCA TAATGATCAT CGCTGGGGAA ATCATCAGGA AGGCAGCGAT AGTAACAGCT GGAAGATCGT TCACACACCT TATAAAGATC AACCACGAAG AGCATCACGC CCTTGTGACT CACGGTGTGT ATAGACTAAT GAGGCATCCA AGTTACTGCG GGTTTCTCAT CTGGTCGGTC GGGACACAAG TTATGCTCTG TAATCCCGTT TCAACGGTTG TGTTTACGGT TGTCGTGTGG CGGTTTTTTG CTCAGAGAAT ACCGTACGAG GAGTATTTTC TGAAGCAGTT TTTTGGGGTA CAGTATCTAG AGTATGCAGA GAGTGTTGCT TCTGGTGTTC CATTTGTGAA CTGAGACTTG AATTACTGTA TTTTT 
Length635
Protein Sequence
Protein Residue
Map Locationscaffold_6: 9481316.. 9481930
Download Sequence
A.thaliana
AGI-codeAT5G23320.1
Descriptionhomolog of yeast STE14 A
TAIR curator summaryEncodes a prenylcysteine alpha-carboxyl methyltransferase involved in methylation of isoprenylated proteins. This protein appears to have lower catalytic activity and a lower transcript expression level than the other ICMT present in Arabidopsis (At5g08335). Analysis of ICMT RNAi lines suggests that this protein may be involved in flower and stem development.
Alias[ATICMTA][ATPCM][ATSTE14][ATSTE14A][ICMTA][STE14][STE14A][ARABIDOPSIS THALIANA ISOPRENYL CYSTEINE METHYLTRANSFERASE A][LPHA-CARBOXYL METHYLTRANSFERASE][homolog of yeast STE14 A][ISOPRENYL CYSTEINE METHYLTRANSFERASE A]
Gene coexpression
MR
MR Locus Description
19.799 Ahg918548 GDP-D-mannose 4,6-dehydratase 1
32.2955 Ahg473913 Primosome PriB/single-strand DNA-binding
41.5812 Ahg493879 Protein of unknown function (DUF 3339)
43.8748 Ahg900248
47.1169 Ahg934167
47.2229 Ahg354710 Subtilase family protein
54.1479 Ahg477985 Ribosomal L29e protein family
69.9428 Ahg480618 Uncharacterised conserved protein (UCP030210)
71.7077 Ahg487289 translocon at the outer envelope membrane of chloroplasts 34
72.5948 Ahg479655 RNA polymerase transcriptional regulation mediator-related
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression