Detail



ID : Ahg942001

Blast(Query) A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|942001|scaffold_602545.1
Sequence
ATTAAATTCC AACTTCAAAT ATGAACCACA GAGCAAAACC AAAGGCTAGC CACCACACCA ATTTTTTTAA AAAAGGTTAT TTGACGTATT GGATCTCTTT GTCTCGTATA CAGTATTTTG CTGATGTGGC AAACGTGGCC ACGTCAGCCA ATTCTACTAG ATATTTTTCA AACCCCTTTA CCCTTTTCAC AACCGTTAGA TCAAGGTCGG TTCACCGCCC AAATCCAATC TCAACCGTTA AAACATTCGC TAGATTTTTT CTAGATATTT TTTTTTCCCT CACAATAATT TTATAGAAGA ATAAAGACTT TTATTTTC 
Length318
Protein Sequence
Protein Residue
Map Locationscaffold_6: 10103722.. 10104031
Download Sequence
A.thaliana
AGI-codeAT5G24470.1
Descriptionpseudo-response regulator 5
TAIR curator summaryEncodes a pseudo-response regulator whose mutation affects various circadian-associated biological events such as flowering time in the long-day photoperiod conditions, red light sensitivity of seedlings during early photomorphogenesis, and the period of free-running rhythms of certain clock-controlled genes including CCA1 and APRR1/TOC1 in constant white light. Acts as transcriptional repressor of CCA1 and LHY.
Alias[APRR5][PRR5][pseudo-response regulator 5]
Gene coexpression
MR
MR Locus Description
2.82843 Ahg950967
3 Ahg494363
4 Virus2799
6.16441 Ahg357047
7 Ahg490844 VQ motif-containing protein
7.74597 Ahg905723 Tetratricopeptide repeat (TPR)-like superfamily protein
9.79796 Ahg356803 Ribosomal protein S5 domain 2-like superfamily protein
10.7238 Ahg944554
11.6189 Ahg889902
15.8745 Virus1482
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression