Detail



ID : Ahg942216

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|942216|scaffold_602760.1
Sequence
TCCCTAAATC GAACTCGATC ATGTTATCGA ATCATCTCCA GAACGGGATC GAATCCGATA ACCTAATCTG GTCTCGTGTC CCTGAATCCG ACGATCCTTC CACCGACGGT GTTACTCTAC TCAACTCTCG CCGTGACGGT GACGGAGGTG TCGATAGTCT CGATTACGAA GTCATCGAGA ATTACGCTTA TAGAGAAGAA CAAGCTCATC GAGGAAAGCT TTATGTTGGT TACTACGTTG CTGTCAAATG GTTCTTCTCT TTACTCATCG GGATCGGAAC TGGATTAGCT GCTGTGTTCA TCAATCTCTC TGTTGAGAAT TTCGCTGGAT GGAAATTTGC TCTTACGTTT GCTATTATTC AGAAGTCTTA TTTCGCTGGG TTTATTGTTT ATCTTCTCAT CAATTTAGTC TTAGTGTTTT CTTCTGCGTA TATCATTACG CAATTCGCTC CTGCTGCTGC TGGTTCTGGC ATTCCTGAGA TTAAGGGTTA TCTCAATGGA ATTGATATTC CCGGAACCTT GCTCTTTAGA ACTCTCATAG GAAAGATATT TGGAAGCATT GGTTCTGTTG GGGGTGGTTT AGCCTTGGGG AAAGAAGGTC CTCTTGTACA TACAGGTGCC TGCATTGCAT CGTTGCTTGG TCAGGGTGGA TCTACAAAAT ATCATTTGAA TTCTAGATGG CCGCAACTTT TTAAGAGTGA TAGAGATCGT CGTGATCTTG TCACTTGTGG ATGTGCAGCT GGAGTTGCTG CCGCTTTTAG AGCTCCAGTT GGAGGAGTGT TATTTGCATT AGAGGAGGTC ACATCATGGT GGAGAAGTCA ACTTATGTGG CGTGTCTTTT TCACTTCCGC TATTGTGGCT GTTGTTGTGC GTACTGCCAT GGGCTGGTGC AAGAGTGGAA TATGTGGACA TTTTGGTGGA GGTGGTTTCA TTATATGGGA TGTATCAGAT GGTCAAGATG ACTACTACTT CAAGGAGCTA CTGCCAATGG CTGTAATAGG AGTTATCGGA GGCCTACTTG GGGCATTATT TAACCAACTT ACACTTTATA TGACATCTTG GCGTCGGAAC TCTTTGCACA AGAAAGGAAA TCGAGTGAAG ATAATTGAAG CATGCATCAT CTCTTGTATA ACTTCTGCAA TCTCATTTGG GCTGCCACTC CTAAGAAAAT GCAGTCCATG CCCTGAGTCA GTTCCTGACT CTGGTATTGA ATGTCCACGG CCTCCAGGAA TGTATGGAAA TTACGTAAAT TTCTACTGCA AGACGGATAA CGAATACAAT GATCTCGCTA CAATTTTCTT CAATACTCAG GATGATGCTA TAAGGAATTT GTTCAGCGCT AAAACAATGC GAGAGTTCAG TGCTCAGAGT CTACTAACTT TTTTGGTTAT GTTTTACACA TTAGCAGTGG TAACCTTTGG CACTGCTGTT CCCGCTGGCC AGTTTGTTCC TGGAATAATG ATAGGATCAA CTTATGGGCG GCTTGTAGGC ATGTTTGTGG TCAGGTTTTA CAAGAAGCTC AACATTGAGG AGGGAACTTA TGCTTTACTG GGAGCTGCTT CATTTCTTGG AGGCTCGATG CGGATGACTG TATCATTATG TGTTATTATG GTTGAAATCA CAAATAACCT GAAACTTCTG CCTCTTATAA TGTTGGTTCT TCTCATCTCA AAGGCCGTCG GTGATGCTTT CAATGAAGGA TTGTATGAAG TACAAGCACG CCTGAAGGGC ATTCCGTTAC TGGAATCGAG ACCCAAGTAT CATATGCGTC AAATGATAGC AAAGGAAGCA TGTCAAAGTC AGAAGGTAAT CTCTTTACCT CGAGTTATCA GGGTTGCAGA TGTTGCTTCA ATTTTGGGCA GCAATAAACA CAATGGATTT CCGGTAATTG ACCACACGAG AAGTGGTGAA ACACTTGTCA TCGGGTTGGT TCTTCGGAGT CACTTGCTTG TTCTCCTTCA ATCTAAAGTC GATTTCCAAC ATAGTCCTTT GCCCTGTGAT CCAAGTGCCA GACATATCAG GCACAGTTTT AGCGAGTTTG CGAAACCTGT TTCATCGAAA GGGTTATGCA TAGAAGATAT ACATTTAACT TCAGATGATT TAGAGATGTA CATAGATCTT GCTCCGTTTT TGAATCCGTC TCCATATGTT GTTCCCGAAG ACATGTCATT GACAAAGGTA TACAATCTTT TCCGGCAACT TGGATTGCGA CATCTATTCG TCGTTCCCCG TCCTTCCCGT GTGATAGGCT TGATCACTAG AAAGGATTTG CTAATTGAGG AAAACGGGGA ATCATCAGCA GTGGAACTCC AACAGTCAAC TAGTGTAAGA GGTCGGTACA GTGAGTCAGC AACGCGGATG GACGCTGCAC GTCCGCTTCT AGACGATCTT TTAGGTTAAT AAAGCAGTCA AACATATAC 
Length2419
Protein Sequence
Protein Residue
Map Locationscaffold_6: 11277440.. 11282451
Download Sequence
A.thaliana
AGI-codeAT5G26240.1
Descriptionchloride channel D
TAIR curator summarymember of Anion channel protein family
Alias[ATCLC-D][CLC-D][chloride channel D]
Gene coexpression
MR
MR Locus Description
2.82843 Ahg314839 ARM repeat superfamily protein
3.74166 Ahg894082
4.69042 Ahg922444 D111/G-patch domain-containing protein
5.38516 Ahg909961
6.40312 Ahg921297 MA3 domain-containing protein
7.14143 Ahg475282 vacuolar protein sorting 34
11.225 Ahg485873 proteophosphoglycan-related
12.6491 Ahg940499 leucine-rich repeat transmembrane protein kinase family protein
14.8997 Ahg474191 scarecrow-like 5
15.6205 Ahg471776
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression