Detail



ID : Ahg942303

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|942303|scaffold_602847.1
Sequence
AAAAAAAAAA CTTAACAAAA AAAAAATGTC ATATGGGTAC GACGATGATG CAAAGAGGAA AAAGAGATAC GTTATTATCT CTATCTCCTC TGTTCTTTTG ATCTCCATGG TTGTTGCAGT TACCATAGGC GTTAGCGTCA ACAAGTCCGA TAACGGAGGT GAAGGAGAAA TCACAACTTC TGTTAAAGCC ATCAAAGATG TTTGCGCACC GACGGATTAC AAGGAGACTT GTGAGGATAC TCTAAGGAAA GATGCGAAGA ACACATCAGA CCCGTTGGAG CTAGTGAAGA CAGCTTTTAA CGCGACGATG AAACAGATAA GTGACGTGGC AAAGAAGTCA CAGACTATGA TTGAGCTACA AAAGGATCCG AGGACGAAGA TGGCTTTGGA TCAATGCAAG GAGCTAATGG ATTACGCAAT CGGTGAGCTT AGTAAGTCGT TTGAGGAGTT AGGGAGGTTC GAATTTCATA AGGTTGATGA AGCGTTGATT AAGCTGAGGA TTTGGCTTAG TGCGACGATT AGCCATGAGC AAACTTGTCT TGATGGGTTT CAAGGGACAC AAGGGAATGC AGGTGAGACG ATTAAGAAGG CATTGAAAAC TGCGGTGCAG TTAACGCATA ACGGGCTTGC AATGGTCAGC GAGATGTCGA ATTACTTGGG ACAAATGCAG ATTCCGGAGA TGAATAGTCG ACGGTTGTTG TCCCAAGAGT TTCCTTCGTG GATGGATGGC CGAGCGCGTA GGCTTTTGAA TGCTCCTATG TCCGAGGTCA AACTGGATAT CGTGGTGGCG CAAGACGGAA GTGGTCAGTA CAAGACGATC AATGAAGCAT TGAATTATGT CCCGAAGAAG AAGAACACGA CTTTCGTGGT TCACATTAAG GCCGGAATCT ATAAAGAGTA CGTTCAGGTG AATAGGAGCA TGACACATCT GGTTTTTATC GGCGATGGCC CTGAGAAAAC TGTCATTTCC GGCAGCAAAA GTTACAAGGA TGGTATTACC ACCTACAAAA CCGCCACTGT TGCAATCGTT GGAGATCATT TCATTGCCAA GAACATTGGG TTCGAGAACA CAGCCGGGGC AATAAAGCAT CAAGCAGTTG CGATTAGGGT TCTATCAGAT GAGTCAATAT TCTACAATTG TAAATTCGAT GGTTACCAAG ATACTCTATA TGCACATTCC CACCGTCAGT TTTACCGCGA CTGTACTATC TCGGGCACCA TCGATTTTCT CTTTGGAGAT GCAGCTGCGG TATTCCAGAA TTGTACTTTA TTGGTGAGAA AGCCACTTCT AAATCAAGCA TGCCCCATTA CAGCCCATGG ACGTAAAGAT CCGCGAGAAT CCACGGGATT TGTTCTCCAA GGATGTACGA TTGTTGGTGA ACCGGATTAC TTGGCAGTCA AGGAAAATAG CAAAGCTTAC CTTGGAAGGC CATGGAAAGA GTATTCAAGA ACTATCATCA TGAACACGTT CATCCCAGAT TTTATTCCGC CGGAAGGATG GCAACCGTGG CTTGGCGATT TCGGTCTTAA CACACTTTTC TACTCGGAGG TACAGAACAC TGGGCCAGGT GCACCTATCA CAAAACGGGT TACTTGGCCT GGAATCAAGA AGTTGAGTGA AGAAGAAATA CTTACATTCA CTCCAGCTCA ATACATCCAA GGTGATGCTT GGATTCCGGG TAAAGGTGTT CCGTATATCC CAGGTCTTTT CACTGGAAAT GGCTCAACAA CCAATCCGAC CGAATTGGGC TCCACAAATT CTACCATAAC TGGCTCCGGT TCGTCTTCTA ACACAACAGG TTCATCAGAT TCACCTTCGA CGGTAGTGTC TCCTTCAACT TCTCCACCAG CTGGCCATCT TGGTTCCCCA CCAGCTACAC CTTCAACGAT AGTGTCTCCT TCAACATCTC CACCAGCTGA CCATCTTGGT TCCCCACCAA CTACACCTTC ATCGGCACCA TGATGGTTGA GGACCTTCGG GTT 
Length1983
Protein Sequence
Protein Residue
Map Locationscaffold_6: 11805880.. 11808036
Download Sequence
A.thaliana
AGI-codeAT5G27870.1
DescriptionPlant invertase/pectin methylesterase inhibitor superfamily
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
11.8743 Ahg351609 Protein of Unknown Function (DUF239)
12.8062 Ahg494865 Pectin lyase-like superfamily protein
12.8062 Ahg906792
17.5784 Ahg477013 Terpenoid cyclases family protein
22.5832 Ahg916047
25.3969 Ahg892274 SGNH hydrolase-type esterase superfamily protein
29.4958 Ahg914199 Plant invertase/pectin methylesterase inhibitor superfamily
32.909 Ahg942435 Galactose oxidase/kelch repeat superfamily protein
37.9473 Ahg351608 Protein of Unknown Function (DUF239)
38.0657 Ahg927977 Kunitz family trypsin and protease inhibitor protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression