Detail



ID : Ahg943036

Blast(Query) A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|943036|scaffold_603580.1
Sequence
ATAAACCTAT CTAGTCTACC ATGGCGGCAA AATCCCAGAA AACCCTCATT CTACTAGCAA ATCTAATCAA GGTTCCTCCA TTAAAAGCTT TCTCTCTCTT AAATTCTCCA AATTTCCATG GATTTCAACA CACACACGAA TCCATATCAA TCCTTCTTCG TCTCCTTCTC TCTGGAAACT TATACTCTCA CGCTCAATCA CTTCTCCTTC AAGTAATCTC CGGAAAAATC CAATCCCAAT TCTTCACATC TTCCTCTCTG CTACACTATT TGACAGAATC AGAAACGTCA AAAACCAAGT CTCGTCTCTA CGAGGTAATC ATCAATGCCT ATGTTCAATC TCAATCCCTA GATTCATCAA TCTATTACTT CAACGAAATG GTCGATAAGG GTTTTGTTCC TGGATCGAAT TGCTTCAACA ATCTCTTAAC TTTCGTTGTT GGGTCTTCTT CTTTCAATCA ATGGTGGTGT TTCTTCAACG AGAGCAAAAT CAAAGTTGTT TTGGATGTGT ATAGCTTTGG GATTGTGATC AAAGGTTGTT GTGAAGCTGG TGAGATTGAG AAAAGTTTTG ATCTTCTTGT TGAATTAAGA GAGTTTGGGT TTTCTCCAAA CGTTGTTATC TACACTACTT TGATTGATGG GTGTTGCAAG AAAGGTGAGA TTGAGAAGGC GAAAGATTTG TTTTTTGAGA TGGGGAAGTT CGGATTAGTG GCTAATGAGT GGACTTACAC GGTTTTGATT CATGGGTTAT TCAAAAATGG GATTAAGAAA CAAGGGTTTG AGATGTACGA GAAGATGCAG GAACATGGTG TTTTCCCTAA TCTCTATACT TATAACTGCG TGATGAATCA GCTTTGTAAA GATGGAAGAA CAAAAGATGC ATTTAAAGTG TTCGACGAAA TGCGTGAGAG AGGGGTTTCG TGTAATATTG TTACTTATAA TACTTTGATT GGTGGGTTAT GTAGAGAGAT GAAGGCGAAT GATGCAATTA AGGTTATGGA TCAGATGAAG AGTTATGTAA TCAACCCGAA TCTGATTACG TATAACACTT TGATTGATGG GTTTTGTAGT GTGGGTAAAT TAGGGAAGGC GTTGAGTTTA TGCAGAGATT TGAAGTCAAG AGGTTTGTCT CCGTCTTTGG TTACGTATAA TGTTCTTGTT TCCGGGTTCT GTAGAAAAGG AGATACTTCA GGAGCAGCTA AGATGGTTAA GGAGATGGAA GAGAGAGGGA TTAAGCCGTC GAAAGTAACA TACACGATTC TTATCGACAC ATTTGCTCGT TCAGATAACA TGGAGACAGC AATTCAGCTT CGATCTTCAA TGGAGGAACT AGGATTAGTC CCGGATGTTC ATACATATAG TGTACTGATT CACGGGTTTT GTATCAAAGG TCAAATGAAT GAAGCGTCGA GGCTTTTTAA GTCGATGGTC GAAAAGATGT TAGAACCGAA CGAGGTGATT TACAATACAA TGATTCTTGG GTATTGTAAG GAAGGTAGTT CTTATAGAGC ATTGAGGTTG TTCAGGGATA TGGAAGAGAA AGAGTTGGCT CCAAATGTTG CTAGCTATAG TTATTTGATT CGAGTTCTTT GTAAAGAAAG AAAATTGAAA GAAGCAGAAG ATTTGGTTGA GAAGATGATT GATTCAGGGA TTGATCCATC TGATACAATC TGTAATTTGA TCTCTAGAGC CAAAACTGAT TCACCTGTAG CTCAAATAAT TGATGCGAGC AGTTTTAATC TGAATTAATG TACACAGTTG GTGTGAAA 
Length1768
Protein Sequence
Protein Residue
Map Locationscaffold_6: 20175356.. 20177123
Download Sequence
A.thaliana
AGI-codeAT4G11690.1
DescriptionPentatricopeptide repeat (PPR-like) superfamily protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
5.38516 Ahg947386
6.32456 Ahg932602 Plant self-incompatibility protein S1 family
7.74597 Ahg928121
9.32738 Ahg946870 RING/U-box superfamily protein
10 Ahg924291 cyclic nucleotide-gated channel 12
10.3923 Ahg359788
12.4499 Ahg924323 Expressed protein
14.7309 Ahg936051 nicotinate phosphoribosyltransferase 1
16.0624 Ahg924292
16.4317 Ahg905805 Ribosomal protein S24/S35, mitochondrial
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression