Detail


ID : Ahg943082

Blast(Query):  A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|943082|scaffold_603626.1
Sequence
GTAAGAGGTT GAAATCAACC ATGGAAGAAG ATGAATCAAC AACACCGAAG AAGAAGACAG ATTCTCAGCT GAATCTTCCA CCGTCGATGA ATCGACCGAC GGTCTCACTT GAGTCACGAA TCAACCGTTT AATTGATTCA AATCATTATC ACTCTCCTTC TAAACCTATT TACTCAGATA GGTTTATTCC AAGTAGATCT GGTTCCAATT TCGCGCTTTT CGATTTGGCA TCTTCTTCGC CGAAGAAAGA TGGGAAAGAA GATGGGGCTG GTTCTTATGC GAGTCTTTTG AAAACGGCGC TTTTTGGTCC GGTGACACCG GAGAAGAGTG ATGTTGTTAA TGGGTTTTCT CCGTCGAGGA ATATTTTTAG GTTTAAGACG GAAACGCAGA GGTCTTTGAA CTTGTATCCG CCTTTTGGTT CTGATGTGGT GACTGGTGTT AGCCCTAGTC CTGCTAAGTC GCCGAGGAAG ATTCTTAGGT CTCCTTATAA GGTATTGGAT GCGCCGGCTC TGCAAGATGA TTTTTACTTG AATCTCGTGG ATTGGTCGGC ACAAAATGTT CTTGCAGTGG GATTAGGGAA CTGCGTGTAT TTGTGGAATG CTTGTAGTAG CAACGTAACT AAGTTATGCG ATCTTGGGGT TGATGAAAGC GTTTGCTCAG TTGGTTGGGC ACTACGTGGA ACACATTTGG CGATTGGAAC TAGTAGTGGA ACAGTACAGA TCTGGGATGT GTTACGATGC AATAGGATAA GAACAATGGA AGGTCATCGT CTAAGAGTTG GAGCCCTGGC ATGGAGTTCA TCTGTACTGT CTTCAGGTAG CAGAGACAAG AGCATACTTC AGAGAGACAT TCGGACTCAA GAAGATCATG TCAGTAAGCT AAAAGGTCAC AAATCCGAAA TATGTGGACT CAAATGGTCT TTTGACAATC GCGAGCTAGC ATCAGGTGGA AATGACAATA AGCTTTTTGT ATGGAACCAA CATTCAACAC AACCGGTTTT GAGATACTGT GAACACGCCG CAGCAGTGAA AGCCATTGCA TGGTCACCAC ATCATCATGG ACTTCTTGCT TCCGGTGGTG GCACTGCTGA TAGATGTATC CGTTTCTGGA ACACCACGAC AAACACTCAT TTAAGTTGCA TAGACACCAA CAGCCAGGTG TGTAATTTGG TATGGTCTAA GAACGTGAAT GAGCTTGTGA GCACGCACGG ATATTCCCAG AACCAAATCA TCGTCTGGAA ATATCCAACC ATGTCTAAAT TGGCAACTCT CACGGGTCAC ACGTACCGCG TTCTGTACCT TGCGGTGTCA CCTGATGGAC AGGCGATTGT GACAGGAGCA GGAGATGAAA CCTTGCGATT CTGGAATGTC TTCCCTTCTC CGAAATCTCA GAGCAGAGAG AGCGAAATCG GGGCATTATC TTTTGGTAGA ACAACAATCC GGTGAAATCT TGACATGATT CTCGA
Length1465
Protein Sequence
Protein Residue
Map Locationscaffold_6: 20386706.. 20389215
Download Sequence
A.thaliana
AGI-codeAT4G11920.1
Descriptioncell cycle switch protein 52 A2
TAIR curator summaryEncodes a putative activator of the anaphase-promoting complex/cyclosome. Promotes exit from the cell cycle and entry into the endocycle leading to endoreduplication.
Alias[CCS52A2][FZR1][cell cycle switch protein 52 A2][FIZZY-RELATED 1]
Gene coexpression
MR
MR Locus Description
11.7473 Ahg491097 Protein kinase superfamily protein
16.9706 Ahg926002 recovery protein 3
29.3939 Ahg945006 pathogenesis related homeodomain protein A
32.7414 Ahg930083 DOF zinc finger protein 2
33 Ahg480545 Translocon-associated protein (TRAP), alpha subunit
33.1361 Ahg481908 alternative NAD(P)H dehydrogenase 2
35.6651 Ahg943283 NAD(P)H dehydrogenase B2
48.1871 Ahg480394 Reticulon family protein
50.9117 Ahg951243 Calmodulin-binding transcription activator protein with CG-1 and Ankyrin domains
52.9622 Ahg327025 calcium-binding EF hand family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression