Detail



ID : Ahg943189

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|943189|scaffold_603733.1
Sequence
CTTCTTCTTC ATCTCTCAGT TATGGAGACG TCGTCGGCGA TCTCGATCGG TACTTGTTTG AAAGAGCATC AGAAGATCTA CAAGGACTGG TTCAACATCG CCGATTCAGA TGGAGATGGT CGTGTTTCCG GTAACGATGC TACGAAGTTC TTCGCGATGT CAAAGCTTTC TCGCCAGGAA CTTAAACAGG TTTGGGCAGT TGCGGATTCG AAGCGGCAAG GATTTCTTGG TTTATCGGAG TTCATCACTG CGATGAAGCT CGTCTCATTG GCACAAGAGG GACATGAAAT TACTTCAGAC CTTCTCAAAG GCTCAGTTGA TATGAAGAGT GTGGAACTTC CAGTGTTGGA AGGACTAGAA AACGTGGTAT CTAAGCTGAA AGTGGCAAAA ACAAATGTGG ATGTTGAAGA AAATGTAGTT ACCAAGCCAC AAGTCACGGC AAAATCTCCT TGGTTCAAAT CAAAATCTAT TATCAAGCCA CAAGTGAATG TTGTGACAAT TGTTGATGGC TTGAAAAGAT TGTACACTGA AAAGCTAAAG CCTTTGGAAG TCACATATCG TTTCAATGAT TTTGCATCCC CTGTACTGAC TAATAGTGAT TTTGACGCCA AACCAATGGT AATGCTTTTG GGTCAGTATT CCACCGGAAA AACAACATTT ATAAAACACT TGCTCGGATG TGATTACCCA GGAGCTCACA TTGGTCCAGA GCCAACAACG GATAGATTTG TGGTTGCAAT GAGTGGACCA GACGAACGCA CCATACCTGG AAATACCATG GCTGTTCAAG CTGACATGCC ATTTAATGGG CTAACAAGTT TTGGAGGTGC TTTCCTCTCA AAGTTCGAGT GTTCTCAAAT GCCGCATCCG GTTTTGGACC AAATTACTCT TGTAGACACA CCTGGGGTTC TTTCAGGAGA GAAGCAAAGG ATGCAAAGGA GCTATGACTT CACTGGTGTC ATCTCATGGT TTGCATCTAA ATGTGATATG ATTCTTCTTC TCTTTGATCC CCACAAGCTT GACATCAGCG ATGAATTCAA ACGTGTGATA ACATCTCTAC GTGGTAATGA AGACAAGATC CGTGTTGTCT TAAACAAAGC TGACCAAGTT GATACTCAAC AACTAATGAG AGTGTATGGA GCATTAATGT GGTCGCTTGG TAAAGTCCTG AACACACCAG AGGTCGTACG TGTCTATATT GGGTCCTTCA ACGACAAACC CATAAACGAA GATGCAGTTG GACCGATTGG AAAAGAACTT TTTGAGAAAG AGCAAAATGA TCTTCTAGCA GACTTAATGG ATATACCCAA GAAAGCATGT GACAGAAAGA TTAACGAGTT TGTGAAGCGA GCTCGAGCTG CAAAGATCAA TGCATACATA ATGAGTCACC TTAAGAAGGA AATGCCAGCA ATGATGGGCA AATCAAAAGC TCAGCAACGT CTCATGGACA ATCTCGAAGA AGAATTTGGA AAGGTGCAGC GAGAGTTTCA TCTTCCGGCT GGAGACTTCC CAAGTGTGGA GCATTTCAGA GAAGTATTGG GAGGCTATAA CATTGACAAA TTCGAGAAAT TGAAGCCTAA GATGATTCAA GCTGTGGATG ATATGCTGGG ATACGATATT CCAGATCTCT TGAAGAAATT CAGAAATCCT TATGATTAAA TAATAATGTC AGCTACTTAA 
Length1680
Protein Sequence
Protein Residue
Map Locationscaffold_6: 20939619.. 20943021
Download Sequence
A.thaliana
AGI-codeAT4G05520.1
DescriptionEPS15 homology domain 2
TAIR curator summaryEncodes AtEHD2, one of the Arabidopsis Eps15 homology domain proteins involved in endocytosis (AtEHD1, At3g20290).
Alias[ATEHD2][EHD2][EPS15 homology domain 2]
Gene coexpression
MR
MR Locus Description
8.77496 Ahg471298 cytochrome P450, family 77, subfamily B, polypeptide 1
11.3137 Ahg494222 Pectin lyase-like superfamily protein
22.5832 Ahg945123 Putative membrane lipoprotein
25.5147 Ahg477690 Li-tolerant lipase 1
26.9072 Ahg920750 Pathogenesis-related thaumatin superfamily protein
27.5681 Ahg493177
27.5681 Ahg484830 P-loop containing nucleoside triphosphate hydrolases superfamily protein
30.6594 Ahg481792 Pathogenesis-related thaumatin superfamily protein
31.1127 Ahg909252 CYCLIN B2;4
31.4643 Ahg488983 Plant invertase/pectin methylesterase inhibitor superfamily protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression