Detail



ID : Ahg943267

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|943267|scaffold_603811.1
Sequence
TTGGTTGGTC CGGCTCTGGT CATGGCTACA GATTTCTTTT GGTCTTACAC CGATGAGCCT CATGCTTCTA GGAGACGTCA GATTCCGTAT CGTTATCCTC AGATTAGACA ACTATTTGGT CCTGATCCAT GGGCTTTCCT CAAGATCGCA TTAGTAGTTA TTCTTCAACT TTCAACAGCT GCAATCCTTC ACAACTCAGG ATGGCTCAAG ATTCTAGCCA TTGGATCATT CCTCAATCAC AATCTCTTTT TAGCAATCCA TGAGCTAAGT CACAACCTTG CCTTTTCAAC TCCCGTCTAC AATCGTTGGC TCGGTATTTT CGCCAATCTC CCAATCGGTG TACCAATGTC GGTAACTTTC CAAAAATACC ATCTCGAGCA TCACGAACAT TATGTTTTTA ACCCGAATCA AGAGACTTAT TCGTATTACG GTCCATTAAA TCTGCTAACA TGGGGTGTCG GCTACCATAA CGAGCACCAT GAGTTCCCGA GGATACCGGG AAATAAGCTG CATTTGGTGA AGGAGATTGC AGGAGAGTAT TATGAAGGAT TGGAGTCGTA AAAGTCATGG TCACAAGTGA T 
Length581
Protein Sequence
Protein Residue
Map Locationscaffold_6: 21271508.. 21274494
Download Sequence
A.thaliana
AGI-codeAT4G04930.1
Descriptionfatty acid desaturase family protein
TAIR curator summaryEncodes a sphingolipid delta4-desaturase, involved in sphingolipid biosynthesis. Specifically expressed in floral tissues. Knockout mutants were devoid of sphinga-4,8-dienine in floral tissues.
Alias[DES-1-LIKE]
Gene coexpression
MR
MR Locus Description
2 Ahg931466
3.16228 Ahg479135 Nodulin MtN3 family protein
4.58258 Ahg905110 WIP domain protein 4
6 Ahg493905 FBD / Leucine Rich Repeat domains containing protein
7.74597 Ahg899629 cytochrome P450, family 81, subfamily D, polypeptide 7
7.93725 Ahg315905
9 Ahg474030
11.4018 Ahg893437
12.6491 Ahg329987 pleiotropic drug resistance 13
13.4164 Ahg914441
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression