Detail



ID : Ahg943323

Blast(Query) A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|943323|scaffold_603867.1
Sequence
TCTTCTTGTC TTTACCTCCG GCGATGGAGG ACGGAGATTA TAGAAATTGG GCTGAGCTTC CAGCAGAACT GACGTCATCG ATCCTTATCC GGCTTGGCGT GGTTGAGATA CTGGAAAATG CTCAGAAAGT GTGCAGATCG TGGCGTCGCG TCTGTAAAGA TCCTTCGATG TGGCGGAAGA TTGTCATAGA CAACGGCGGA GACAGGGAAA GCTTCCAGTA CGACCTCGAT TCCATGTGCC GTCACGCCGT TGATCGTAGC CAGGGCGGTT TGCTTGAGAT TGACATTGAG TACTTTGGTA CTGATAAACT CCTCGATTAC ATCGCCGATA GGTTCTCTCT CTCTCTCTTC TCCATTTCAA GTAATCTGAG AAGCCTTAGA CTTGTAAGAT GCCATCAAAT AACAGATAAG GGAGTTGCCG AAGCAGTTGT GAAACTTCCA TTGCTTGAAG ACCTCGAGGT CTCGTACTGC TCATTTTCAG GAGAGTGTGT GACTGTTGTA GGTCAGTCTT GTCCACATCT GACGACATTG AAGCTAAACC GCCGACCTCG CGTCGAGTTT GTAATAAATA TGCGTGATCA TAATGCCATA GCAATTGCAG AAAGCATGCC TGAGCTACGC CACCTCCAGC TTTTAGGGAA CGCACTAACC AACACTGGCT TGAACGCCAT TCTTGACAGT TGTACTCACC TGGACCATCT TGATTTACGC CAGTGTTACA ATATTAACCT TCTCGAGGAT CTCATGAAGC AATGTGTTGA AAGGATCAAA TATTTGAGAT GCCCCAATGA CTCAATCGCT GATTGCTCAA CCGAAACCAG CTTTCTTGAT ATTGATTCAG ATGATGGCTT TCCCTATATG TATGGTGGCT ATGACATTAT GGGCGGCTAT GACATTATGG GCAGCTATGA CATGATGGGC GGATATGACA TTATGGGCAG CTACGACATG ATGGGCGGAT ATGACATTAT GGGCGGCTAT GACTCAGAAA CTGCTTCCTC CTCTTGGTCG TCGACGTCTA CTTCCGTTTT TTCGCTGGTG AAAGATGAAG AGGTGAGAAA TTGGGCAGAA CTTCCACCGG AACTGACATC GTCGATCCTT GGCCGGCTTG GTACGATTGA TATACTGGAA AATGCTCAAA AAGTGTGCAG ATCGTGGCGT CGCGTTTGTA AAGACCCCTC GATGTGGCGG AAGATTGACA TGGACAACCT CGGAGACTTG GGAGCCATGG GGTACGATCT TGAGATCATG TGTCGTCATG CAGTAGATCG TAGCCAGGGC GGCTTGGTTG AGATTGACGT TTGGTACTTC GGTACTGATG AACTCCTCAA TTACATTGCC GACAGGTCGA GTAATCTGAG AACCCTTAGA CTTATAATGT GCTATCCAAT AGCAGACGAA GGATTTATCG AAGCAGTTGT GAAGCTTCCA TTGATTGAAT ACCTCGAGCT TTCACACTGC TCCTTGTCAG GAGAGTCTCT GAAAGTTGTA GGTCAGTCTT GTCCAAATCT GAAGACATTG AAGCTAAACT CCGAGCCTGA CCCCAAATTT AATGATGATG AGTTTAATAA TGAAGATGCT CTAGCAATCG CAGAAAGCAT GCCCGAACTA CGCCACCTCC AGCTTTTTGG GAACATACTA ACCAATGTGG GATTGAACGC CATTCTTGAC GGTTGTCCTC ACCTGGAACA CCTTGATCTA CGCAAATGTT CCAACGTTGA TCTTACCGGG GATCTAGAGA AGCGATGCGT TGAGAGGATC AAAGATTTGA AACGCCCCAA TGACTCAACC GCTGGTCACC CATATGGTAG AATTACAGTT GATGTCCGCT ATGATGCCAG CGACTATTAT TGGTAGTAGA TATTGAATCT TTCGGA 
Length1876
Protein Sequence
Protein Residue
Map Locationscaffold_6: 21560270.. 21564698
Download Sequence
A.thaliana
AGI-codeAT4G05500.1
Description
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
31.7017 Ahg330015 Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger protein
32.9242 Ahg323420 ataxia-telangiectasia mutated
33.3617 Ahg928570 defective in exine formation protein (DEX1)
36.4829 Ahg475009 Leucine-rich repeat protein kinase family protein
38.8072 Ahg475840 Zn-dependent exopeptidases superfamily protein
39.8748 Ahg495386 DNAJ heat shock N-terminal domain-containing protein
47.7598 Ahg487067 ubiquitin-protein ligase 4
50.7937 Ahg496673 histone acetyltransferase of the MYST family 1
51.4393 Ahg487359 phosphoribosylanthranilate isomerase 2
55.7315 Ahg481833 pumilio 3
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression