Detail


ID : Ahg943407

Blast(Query):  A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|943407|scaffold_603951.1
Sequence
TGTTGCGTAT ATTAGTGACA ATCATGGTTC GATTGTTGCA GCCTAAACAC ATGGTACAAG CTGTGAATGC TTTGCATTGG CGAAACTCTG TGGAATTTCA TAAGCTGCTT AAAGATAATG GAGATTTCTC TATTTGCTTT AACTCTGATC AAGGGTTACC ACAAAAGATT AGTGTTGAGA AAATGGTGAA AATGTTACCT CGGCACCTCA TTGCGGTGGT TATGACTCCT AATAAAGATG GAAAGTCTCG ATATATATTG TGTGGGATCA GACTGTTGCA GACGTTGTGC GACTTAACAC CTCGTAACGC GAAACTCGAG CAGGTCTTGC TTGACGATGT GAAATTATCA GCACAGATGA TTGATCTGGT GATTATTGTG ATAATAGCTC TTGGCCGTAA CAGAAAGGAA AGCTGCAATT CGAATAAAGA ACCGTTACTA GAGGCTACAC TGGTGGCTTC TTGTCTCCAC CTGTTTCACG GGTTTATCTC TCCTAACTCC CAAGATCTTG TTCTCGTCTT GCTTGCCCAC CCAAGGGTTG ATGTGTTTAT AGACAGTGCT TTTGGAGCTG TCCTCAATGT TGTGATATCT TTGAAAGCAA AGTTGCTGTA TCGACAAACT GACTCCCCAA AAAGGTTAGG TGCAAGTTCT GTAGAGGAGG TCAACTTCCA CTGCCAACAA GCTGAAGCTG CTTTGCAGTT CCTTCATTCT CTCTGCCAAC ACAAACCGTT TAGAGACCGT GTCGCTAAAA ACAAGGAGCT ATGTGGAAAA GGTGGCGTTC TTAGGCTAGC TCAATCCATA CTATCACTAG CTATTACACC TGAATTTGTT GGAGCAACCA TAACTATAGC TTCCACATCT AGAATGAAAG CAAAAGTCCT TTCAATTTTG CAGCATTTGT TTGAGGCGGA AAGTGTCTCA TTCCTTGACG AGGTTGCAAA TGCAGGAAAC TTGCAATTAG CCAAAACTAT TGCCTCAGAG GTTCTTAAAT TACTGAGGCT TGGCCTTTCT AAAGCTTCCA TGGCTACTGC TTCTCCTGAC TACCCGATGG GTTTTGTGCT ACTTAACGCT ATGCGCTTGG CTGACGTGCT CACGGATGAC TCAAATTTTC GATCTTTTTT CACTGAACAT TTTAGCATGG TTCTCAGTGC GGTATTTTGT CTCTCTCATG GAGATTTCTT GTCAATGTTG TGCTCTTCTG ATCTTTCTTC AAGGGAGGAT GATGCGAATG TTGATTACGA TCTGTTTAAG TCAGCCGGAT GGGTTTTAAG TATATTTTCA TCTTCTGGGC AATCAGTCAC ACCTCAATTC AAGCTCAGTT TACAAAATAA CCTTACCATG TCTTCATATG CACACCAACG AACATCCTTA TTTATTAAAA TGATCGCGAA TCTTCACTGT TTCGTTCCCA ACGTCTGCGA AGAACAGGAT AGGAACCGTT TCATTCAGAA TGTTATGACT GGATTGCGAA AAGATCCTTC AAGCATATTG ATTAAGATGT TACCAGGCTC TTCATATACT CCGGTGGCAC AGAGAGGCAC TGGTGTTTGC AGAAACCTAG GTTCTCTGTT GCGCCATGCA GAATCCTTGA TCCCTAGTTC CCTCAATGAG GAAGATTTCC TGCTTTTGAG GGTGTTTTGT GACCAGTTGC AACCGCTAAT CCATTCCGAA TTTGAGGAAA GTCAAGTACA GGATATTGAA GGTACGGGAG GGAACTTATC TGGTAAGCAG CAGAGAAAAG AGCTTCTGAA TCTTAACAAT GAGGAAGCTT CAGAGAATTG TGATGTCCGA GTTGAAGGTA TGATAAAAAA GCAAGGCGTG AACGAGGAGG TGGACACAGT TGAACGGTTG AAAGAAAGCG ATGCAGATGC GAGCAATCTT GAAACCAGTG GTTCAGATAC AAGCTCTAAC AGAGGGAAGG GTCTGGTTGA AGATGGAGAG TTGGTTCAGA AAATGAGCAA GCGGTTTAAA GCCAGTGCGT CAGGAGAGGT GAAGGAGGAT GAGAAATCTG AAACCTTACT TGTCTTTGAG AAGCAGAGGA CGAAACGGAA GCGTAGTATT ATGAATGATG ATCAAACGGG GATGATCGAG AAGGCACTTG CTGATGAACC TGATATGCAG CGGAATTCAG CTTCGATACA GTTATGGGCT GATAAATTAA GTCAGAAGTT TATTCTCAGG CTGAATAACC GAAAAGCGAA ACTAGCTCGA GCAAACAAGC AAACGGGGAC AGTTCGTGAT AATAACAGCT CAGGGGAATT ACCGGAGAGC CCTGGAGATG AAAACACTTG GCAGCAGAAA CCATCAACAC CATTTAAAGA TCAGACTGCA TCTATAACCC TGAAAACAGG AGAGAATCTG TTGAGATCAT CGTCATCATC AGAAGAAGGG ATAAAGCAAG GGCAACAAGT GAGGCTTATG GACGAGAGAG GAGACGAGAT CGGGAAAGGA ATGGTGTTGA GAACAGACGG TGAATGGTAC GGTTTAAGCC TGGAGACGAG ACAGATTTGT GTAGTTGATG TAATGGAGCT TAGTGAGTCA TATGATTGGA GCAAAAAGAT GATCCCTTAT GGATCTGATG ATGTTGGTAG GACTTTCACA GAGGCGAATT CGAGGTTTGG AGTTATGAGA GTGGCTTGGG ATGTGAATAA GCTTCAGTAT TAGAGTTAGA CTCAGTTGCA TTG
Length2683
Protein Sequence
Protein Residue
Map Locationscaffold_6: 21878323.. 21882817
Download Sequence
A.thaliana
AGI-codeAT4G03090.1
Descriptionsequence-specific DNA binding;sequence-specific DNA binding transcription factors
TAIR curator summary
Alias[AtNDX][NDX][Nodulin Homeobox]
Gene coexpression
MR
MR Locus Description
9.38083 Ahg919092 myosin XI B
19.6723 Ahg475389 FAD/NAD(P)-binding oxidoreductase family protein
21.166 Ahg920538 Aldolase-type TIM barrel family protein
24.0832 Ahg492340 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase family protein
24.9199 Ahg484955 Nucleotidyltransferase family protein
25.4558 Ahg481413 DNA-binding protein phosphatase 1
33.5857 Ahg486119
39.37 Ahg324042
51 Ahg477950 HCO3- transporter family
53.8052 Ahg491360 Transducin family protein / WD-40 repeat family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression