Detail



ID : Ahg943665

Blast(Query) A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|943665|scaffold_604209.1
Sequence
TTTATTTCAA ACACAAGTTA TATGAAACCC AAGTTCCATG AAACCCAAGC TAAGACCAAA CATGTTGAAG ATAGAGGTGG ATTTGTATCC AATCTACCAG ATAAGGGACT TAAGACACAC TTGAGTTCAG AACCTGACAT AAAAGAAGCC ACTGTAGATA GCCAGACAGA TGTTCTTCTC GTGGCCAGTG ATGGCATTTG GAAGGTAATG ACAAATGAAG AGGCAATGGA GGCTACGATG ATCTTGATTT GGTTAATCTA GTGTGTCACG CTGTATGGGC T 
Length281
Protein Sequence
Protein Residue
Map Locationscaffold_6: 23093654.. 23094215
Download Sequence
A.thaliana
AGI-codeAT1G22280.3
Descriptionphytochrome-associated protein phosphatase type 2C
TAIR curator summaryEncodes a phytochrome-associated protein, PAPP2C (phytochrome-associated protein phosphatase type 2C). PAPP2C interacts in the nucleus with phyA (phytochrome A) and phyB. Functions as a regulator of phytochrome-interacting factor PIF3 by dephosphorylating phytochromes in the nucleus.
Alias[PAPP2C][phytochrome-associated protein phosphatase type 2C]
Gene coexpression
MR
MR Locus Description
1.73205 Ahg923548
3.16228 Ahg930762
3.16228 Ahg931091
4 Ahg334861 ATP binding;GTP binding;nucleotide binding;nucleoside-triphosphatases
4.47214 Ahg942415
4.89898 Ahg906746
5 Virus1885
7.07107 Ahg927996
7.34847 Ahg887813
7.4162 Ahg930729
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression