Detail



ID : Ahg943671

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|943671|scaffold_604215.1
Sequence
TAAATTCGAC CTAATCACCA ATGGGTAAGA AGACTGGTTC TTCTTCTTCT TCTTGGCTCA CCGCCGTTAA ACGAGCTTTC CGATCTCCCA CCAAGAAAGA ACATAACAAC AATGCTCACG GTAATGCAGT CGACGAAGAT GAAGACAAGA AGAAAGAGAA GAAACGGTGG TTATTTAGAA AACCGACGAA TCATGACTCT CCGGTGAAGA CCTCCGGCGT CGGAAAAGAA GTTCCGGCAC AGAAATCCAC AGATACTACG ACGATCAACC CAACCGCTTC ATCCTCTGTT ACAAAACAGA GATACACCGC ATCTACACCG CCCACCACCT TCTCCGCCGC ATCGGAAACT CATCCTCCTC CTCCGACGAT GGAGTTACTA AATCTTACAA GACGGACTTA TACCGCAAGA GAAGATTACG CAGCTGTTGT AATCCAAACT GGTTTCAGAG GCTATCTGGC AAGAAGGGCA TTAAGAGCAT TGAAAGGGCT TGTGAAGTTA CAAGCACTTG TGAGAGGTCA CAATGTGAGG AAGCAAGCAA AGATGACTTT AAGGTGTATG CAAGCTCTGG TTCGCGTCCA ATCTCGTGTG CTTGACCAAC GTAAACGTTT GTCTCACGAC GGTAGTCGCA AATCTGCCTT CAGCGACACT CAAAGTGTAC TTGAATCTCG TTATCTTCAA GACATTTCAG ACCGAAGATC AATGTCAAGA GAAGGAAGCA GCATTGCGGA AGATTGGGAT GATCGACCAC ACACGATTGA GGAAGTGAAA GCAATGTTGC AACAAAGACG AGACAATGCG TTGAGACGAG AGAGTAACAA TAGTTTATCA CAAGCTTTTT CTCACCAGGT TCGGAGAACA AGAGGTAGTT ATTCTACAGG AGACGAGGAT GAAGAAGAGA GGCCGAAATG GTTAGACCGA TGGATGGCTT CTAAACCATG GGATAAACGA GCTTCAACGG ATCAAAGAGT ACCACCAGTT TACAAAACCG TGGAAATCGA TACTTCTCAA CCGTATTTAA CCCGTGGTAA CTCAAGAACA GGTGCCAGTC AAAGCCGTAA TCAAAGGCCT AGTTCACCAT CAAGAACCAG CCATCATTAC CAACAACACA ATTTCTCATC AGCTACACCG TCTCCCGCTA AATCTAGACC GATACAAATC CGATCCGCCA GTCCACGGAT CCAAAGAGAT GACCGGTCAG CATACAACTA CACATCAAAC ACACCTAGCT TGAGATCTAA CTATAGTTTC ACTGCAAGAA GTGGTTATAG CGTTTCTACA GCTACTACTA CTGCTACAAA TGCTGCGTTG CCAAACTACA TGGCCATTAC GGAATCCGCA AAGGCTAGAA TCCGGTCTCA AAGTGCACCA AGGCAACGAC CTTCGACACC CGAGAAAGAA CGTATCGGGT CAGCTAGAAA ACGGCTTTCG TTTCCGGTTC CACCGCTGCC TCAGCAAATA GACGGTCAGA GTTTAAGGAG TCCAAGCTTC AAAAGTATAG GAGGCTCACA ATTGGGTGCA TTGGAGCAAC AATCAAATTA CTCTTCTTGT TGTACTGAGT CTCTTGGTGG TGGTGGAGAG ATATCACCTG CTTCTACTAG CGATTATAGG CGATGGTTAA GATGATTCCA TAATCCAACC AAATC 
Length1645
Protein Sequence
Protein Residue
Map Locationscaffold_6: 23111527.. 23113586
Download Sequence
A.thaliana
AGI-codeAT4G00820.1
DescriptionIQ-domain 17
TAIR curator summary
Alias[iqd17][IQ-domain 17]
Gene coexpression
MR
MR Locus Description
17.6918 Ahg496986 Chalcone-flavanone isomerase family protein
22.2486 Ahg916961 basic helix-loop-helix (bHLH) DNA-binding superfamily protein
26.6458 Ahg484163 AAA-type ATPase family protein
31.0805 Ahg940520 AINTEGUMENTA-like 6
37.7492 Ahg487033
52 Ahg473846 Remorin family protein
61.1882 Ahg324027 D-aminoacid aminotransferase-like PLP-dependent enzymes superfamily protein
63.616 Ahg472691 Galactosyltransferase family protein
71.4143 Ahg338071 GRAS family transcription factor
78.8036 Ahg918934 cellulase 2
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression