Detail



ID : Ahg944404

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|944404|scaffold_700633.1
Sequence
GTTTCTTGAC TGTTGTTTCT CTCATGGCGG ATATCGTGAA ACAGATCTTA GTAAGACCGA TTCAATTAGC GGATCAGATA ACTAAAGCGT CAGACGAAGC TTACTCATTC CGTCAAGAAT GTCTAGAGGT CAAAGCCAAA ACGGAAAAGC TCGCCGGTCT CCTCCGTCAA GCGGCGCGTG CAAGCAACGA TCTCTACGAA CGTCCCACGC GCCGTATCAT CGACGATACA GAGCAAGTCC TCTTCAAAGC ATTAGCCCTC GTCGAAAAAT GCCGCGCCAC GGGACTGATG AAACGTGTTT TCACCATTAT CCCCGCGGCT GCGTTTAGGA AAATCACGAT GCAGTTAGAG AATTCAATCG GAGACGTCTC TTGGCTTCTC CGTGTCTCTG CTTCAGGAGA TGATCGTGAC GATGAGTATT TAGGTCTCCC TCCCATCGCT GCCAACGAAC CAATCCTCTG TTTGATTTGG GAACAAGTTG CAATTCTGTT CACAGGCTCT CTCGATGATC GATCCGATGC AGCGGCTTCG CTCGTGTCGC TTGCACGTGA CAATGATCGA TACGGGAGGT TGATTATTGA AGAAGGTGGG GTTCCTCCGT TATTGAAACT TGCTAAAGAA GGTAAAATGG AAGGTCAAGA AAACGCGGCT CGAGCCATTG GGTTATTAGG ACGTGATCCA GAGAGTGTTG AACAGATTGT GAACGCAGGT GTGTGTCAAG TGTTTGCAAA GATTCTTAAA GAAGGTCATA TGAAAGTTCA AACTGTTGTT GCTTGGGCTG TTTCTGAATT AGCTTCAAAT CATCCAAAAT GTCAAGACCA TTTTGCTCAG AACAACATCA TTCGTTTCCT TGTAAGCCAT TTAGCTTTTG AGACGGTTCA AGAACATAGC AAATACGCTA TCGTGAGTAA CAAGCAGACA TTGTCTTCGA TCCATACGGT TGTGATGGCA AGTAATACGA ATCCGACGGG TAAGAAGGAG AATAGCGAGC AAGACGAGAC AAAAAGCAAT ATTTCACATC CTATGAGTAA TCAAACACCG AGCCAGATGC ATAGCTTGAT TACAAACACA TTAGCAATGA AGGGTTCGGG TCCGAGTTCA GGTTCGGGTT CAGGTTCGGG TTCGGGAACT AACAAGAATC AGATAAAACA GAGCAACCAA CAGCACCAGA ATCATACCAA GGGTGGTTCA AACCCGAGAG GGAACAACCC GACACATGTT TCTTTAATGG GGACAAGCAT AAAAGGAAGA GAGTTTGAGG ATCCAGCTAC TAAAGCTCAG ATGAAGGCAA TGGCTGCAAG AGCACTGTGG CAACTCTCAA GAGGGAATCT CCAAATATGT AGAAGCATAA CAGAGTCAAG AGCATTGCTC TGTTTTGCGG TTCTGTTAGA GAAAGGAGAC GATGAAGTCA AGTCATATTC CGCTTTGGCA ATGATGGAGA TCACAGATGT GGCTGAACAG TATCCAGAAC TTAGACGTTC AGCTTTCAAA CCAACCTCTC CTGCTGCAAA AGCTGTAGTT GAACAGTTAC TTAAGGTGAT CGAAAACGAA ATAACGGACC TTCTAATCCC GTGTATCAAA TCAATCGGTA GTCTTTCAAG AACATTCCGT GCAACGGAAA CAAGGATCAT TGGACCACTT GTGAAGCTTC TAGATGAAAG AGAAGCAGAG GTTGCAATGG AAGCCGCAGT AGCGCTTATC AAATTCTCAT GTACCGATAA TTTCCTTCGC GATAACCACT CTAAAGCGAT TATAGCAGCA GGAGGTGCAA AGCATTTGAT TCAATTGGTC TACTTTGGAG AACAAATGGT TCAAGTCCCG GCTTTGATGC TACTTTGTTA TATAGCTTTG AATGTACCGG ACAGTGAGGC TTTAGCTCAA GAAGAGGTTC TTGTAGTGCT TGAATGGTCG ACAAAGCAAG CTCATTTGGT GGAAGCACCG ACGATTGACG AGATTTTACC AGAAGCAAAG AGTAGATTGG AGCTTTACCA ATCTAGAGGG TCAAGAGGAT TTCATTGATA TATGACAAAG CTTCACTC 
Length2038
Protein Sequence
Protein Residue
Map Locationscaffold_7: 2415503.. 2417540
Download Sequence
A.thaliana
AGI-codeAT4G34940.1
Descriptionarmadillo repeat only 1
TAIR curator summaryArmadillo repeat protein. One of a family of four in Arabidopsis. Located in the nucleus and cytoplasm of pollen vegetative cells, and in the cytoplasm of egg cells. Involved in the signaling network controlling tip growth and actin organization in the pollen tube.
Alias[ARO1][armadillo repeat only 1]
Gene coexpression
MR
MR Locus Description
3 Ahg923601
3.16228 Ahg940654
5.74456 Ahg492604 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein
7.74597 Ahg942612
8 Ahg945478 Protein of unknown function (DUF630 and DUF632)
9.16515 Ahg486590 low-molecular-weight cysteine-rich 8
10.7238 Ahg949224 Protein of unknown function (DUF1278)
11.8322 Ahg908010
14.4222 Ahg915752 Tapetum specific protein TAP35/TAP44
14.6969 Ahg918604
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression