Detail



ID : Ahg944450

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|944450|scaffold_700679.1
Sequence
TTTTCCGACA CAAACAGAGC AATGACGTCC GTTAACGTTA AGCTCCTTTA CCATTACGTC TTAACCAACT TTTTCAACCT CTGTTTGTTC CCGTTAACGG CGTTCGTCGC CGGAAAAGCC TCTCGGCTTA CCACAAACGA TCTCCACAAC TTCTTTTCCT ATCTCCAACA CAACCTTATA ACCGTAGCTA TACTCTTTGC TTTCACTGTC TTTGGTTTTG TTCTCTACAT GGTAACCCGA CCCAAACCGG TTTATCTCGT TGACTACTCG TGCTACCTTC CACCACCGCA TCTCAGAGCC AGTGTCTCCA GAGTCATGGA TGTTTTCTAT CAAATAAGAA AAGCTGATAC TTCACGGAAC GTGGCATGCG ATGATCCGTC CTCGCTTGAT TTCCTGAGGA AGATTCAAGA GCGTTCAGGT CTAGGTGATG AGACCTACGG TCCCGAGGGA CTCCTTCACG TGCCCCCACG GAAGACTTTT GCAGCGGCAC GTGAAGAGAC AGAGCAGGTT ATCATTGGTG CGCTCGAAAA TCTATTCCAG AACACCAAAG TTAACCCTAG AGAGATTGGT ATACTTGTGG TGAACTCAAG CATGTTTAAT CCAACTCCTT CGCTTTCCGC GATGGTCGTT AATACTTTCA AGCTCCGAAG CAACATCAAA AGCTTTAATC TTGGAGGAAT GGGTTGTAGT GCTGGTGTTA TCGCCATTGA TCTTGCGAAG GACTTGTTGC ATGTTCATAA AAACACTTAT GCTCTTGTGG TGAGCACTGA GAACATCACT CAAGGGATTT ATGCTGGCGA AAATAGATCA ATGATGGTTA GCAATTGCTT GTTCCGTGTT GGTGGGGCCG CGATTTTGCT CTCCAACAAG CCTAGAGATC GGAGACGGTC CAAGTACAAG CTAGCTCACA CGGTTCGAAC CCATACGGGA GCTGATGACA AGTCTTTTCG ATGTGTGCAA CAAGAAGACG ATGAGAGTGG TAAAATCGGT GTTTGTCTGT CAAAGGACAT AACCAATGTT GCGGGGACAA CGCTAAAGAA AAACATAGCA ACATTGGGTC CGTTGATTCT TCCTTTAAGC GAGAAATTTC TTTTTTTCGT TACCTTCGTC GCCAAGAAAC TTTTAAAGGA CAGAATCAAG CATTACTATG TCCCGGATTT TAAGCTTGCT ATTGACCATT TCTGTATTCA TGCCGGAGGC AGAGCCGTGA TCGATGAGCT AGAGAAGAGC TTAGGACTAT CACCGATCGA CGTGGAGGCA TCTAGATCAA CGTTACATAG ATTTGGGAAT ACGTCGTCTA GCTCAATTTG GTATGAATTG GCATACATAG AGGCAAAAGG AAGAATGAAG AAAGGGAATA AAGCTTGGCA GATTGCTTTA GGATCAGGGT TTAAGTGTAA TAGTGCGGTT TGGGTGGCTC TACGCAATGT CAAGCCTTCG GCAAATAGTC CTTGGCAACA TTGCATCGAT AGATATCCGG CTAAAATTGA TTCTGATTTG TCAAAGTCAG AGACTCATGT CCAAAACGGT CGGTCCTAAT TTGATGTACC CGAGTGCCA 
Length1559
Protein Sequence
Protein Residue
Map Locationscaffold_7: 2576923.. 2578481
Download Sequence
A.thaliana
AGI-codeAT4G34520.1
Description3-ketoacyl-CoA synthase 18
TAIR curator summaryEncodes KCS18, a member of the 3-ketoacyl-CoA synthase family involved in the biosynthesis of VLCFA (very long chain fatty acids).
Alias[FAE1][KCS18][FATTY ACID ELONGATION1][3-ketoacyl-CoA synthase 18]
Gene coexpression
MR
MR Locus Description
2.64575 Ahg900094
15.5885 Ahg908046
16.9411 Ahg925850 TRAF-like superfamily protein
19.6214 Ahg949601 nuclear factor Y, subunit C8
22.4944 Ahg902719
23.2379 Ahg345260 Protein of Unknown Function (DUF239)
26.533 Ahg314242
26.8328 Ahg908047
29.3428 Ahg926315 Thiamin diphosphate-binding fold (THDP-binding) superfamily protein
35.2278 Ahg914177 Stigma-specific Stig1 family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression