Detail



ID : Ahg944456

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|944456|scaffold_700685.1
Sequence
CCTACTCCAC AAAGAACAAA CAATGTCGTC GAAGATGATC GTGTTGATGA GCTCCGATGG TCAGTCGTTT GAGGTGGAAG AAGCGGTAGC AATCCAATCT CAGACCATAG CACATATGGT TGAAGACGAT TGCGCCGCTA ATGGAATCCC TCTTGCAAAC GTGACAAGCA AGACTCTTGC GAAAGTGATT GAGTACTGCA AGAAGCACCA CGTCGATGAG GCTAACCCTA TCTCTGAAGA TGAACTCAAG AAGTGGGACA CGGAGTTCAT GGAAACCGAT CAATCCACGA TATTTGATCT CATTCTTGCT GCGAATTACC TAAACATCAA AAGCTTGCTT GATCTCACAT GTCAAACTAT TGCGGATATG ATCAAAGGCA AGAATCCAGA GGAGATTCGT ACACTTTTCA ACATTAAGAA TGATTTTACA CCTGAGGAGG AAGAAGAGGT TCGTAGGGAG AATCAATGGG CTTTTGAATG ATCGGATGAA TCAAAAACCT A 
Length501
Protein Sequence
Protein Residue
Map Locationscaffold_3: 9136469.. 9136892
Download Sequence
A.thaliana
AGI-codeAT4G34210.1
DescriptionSKP1-like 11
TAIR curator summaryone of 20 SKP1 homologs in Arabidopsis. Protein is most similar to ASK12 and RNAi lines show defects in stamen development.
Alias[ASK11][SK11][SKP1-like 11]
Gene coexpression
MR
MR Locus Description
4 Ahg333411
10.247 Ahg917023
11.4891 Ahg931258 RING/U-box superfamily protein
15.8745 Ahg474061 response regulator 19
16.4317 Ahg938033
16.4317 Ahg897020
21.6333 Ahg489981 F-box associated ubiquitination effector family protein
22.3607 Ahg949066 Protein of unknown function (DUF784)
23.9792 Ahg942723
23.9792 Ahg943073
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression