Detail



ID : Ahg944805

Blast(Query) A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|944805|scaffold_701034.1
Sequence
TTTTCTTTCA AGTAACCGTT CCATGGCTCT CAATCTCCGC AACAAACAGA TGGAATGTAT AATCCGGATG CTGAACCTGA ATCAACCATT GAATCCAAAC GAGGAATGTT ACAAGGCCTT GATCTACGAC GATTTCTGTG AGAAGATTAT CGCTCCTCTG ATGCAAGTGA AGGATCTTCG TAAACAAGGA GTTACACTTC CCTTGTCCAT CAACAAAAAG AGAGAAGCTG TTCGTGATGC TGCAGCTGTC TACTTTCTTC AACCCACTGA ATCCAACATC CAGAGAATCA TTGCAGATGC TTCTAGATCT CTTTACCATT CCTATCATCT GAATTTCTCG TATCGTATCC CTCGCCCGCT CCTAGAAACT CTCGCTTCTG CGACTCTGAA TTCCGGTTCC ACTGAGAGAC TTGCAACGGT GCATGATCAG TATCTCGAGT TTGTTACTTT GGAAGATAAC ATGTTTTCTT TGGCTCAGGA ATCTATCTAT CTTCAGTTGA ATGATCCATC AGCAGGAGAT AGAGAGATCG AGGAGATTAT CGAAAAGGTC GCTAATGGGC TGTTCTGTGT ATTGGCAACG CTTGGTGTGG TGCCTGTAAT CCGATGTCCT CGTGGTGGAC CAGCGGAGAT GGTTGCATCT TCGTTGGATC AGAAACTGAG GGATCATCTT CTGTCTAAGA TCAATCTGTT TACCGAAGGT GGAGGCGGTT TCATTAGTTC GTTTCAGCGG CCTTTGTTGT GTATTTTCGA TAGAAACTTT GAACTCTCGG TTGGGATTCA GCATGATTTC AGATACAGGC CTCTTGTTCA TGATGTTTTG GGTCTAAAGC TCAACAGTTT GAAATTGCCT GGCCAAAAAG ATGATAAGAA AACATTTGTA GACAGTTCAG ACCCGTTCTG GTCAGCAAAT GGTTCTTTAG AGTTTCCTGA AGTCGCTGTA GAAATCGAAA CTCAGTTGAA TAAGTACAAA AAAGACGTGG AAGAGGTTAA CAGGAGAACT GGAGGTGGGA ACGGGAGTGC AGAGTTTGAT GGGGCTGATC TGATTGGGAA CACCAAGCAT CTGATGAATG CTGTGAACTC ACTTCCGGAG TTGACAGAGA GAAAGAAGGT GATTGACAAG CACACCAACA TTGCGACTGC GCTGCTAGGA GAGATCAAGG AGCGATCTCT GGATGCATAC ACTAAGAAAG AGAATGAGAT GATGGTGAGA GGCAGCATAG ACAGGAGCGA GCTTCTATCT GTTTTGAAAG GGAAGGGTAC CAAAATGGAC AAGTTACGAT TTGCCATCAT GTACCTAATC TCCTTGGAAA CCATCAACCA GGCTGAAGTT GAAGCCGTGG AAGCGGCATT GCGTGAAGCT GAGGCCGATA CAAGAGCGTT TCAGTATGTG AAAAAGATCA AGTCGCTGAA TGTGTCTTTG GCAGCCTCAG CAAGCAGAAG CAACATTGTT GACTGGGCTG AGAAGCTTTA TGGTCAGTCT ATAAGCGCGG TCACTGCAGG GGTCAAGAAT CTCTTATCAA GTGATCAGCA ACTGGCGGTG GCGCGGACAG TTGAAGCCTT AACTGAGGGA AAACCAAACC CAGAAACCGA TTCATACCTC ATGCTGGATC CGAGAGCTTC AAAGTCAGGA TCTAGTGGTA ATAGTTATGT GAAGGGGCCT TTCAAAGAAG CCATAGTTTT CATGATTGGT GCAGGTAACT ACATCGAATA TAGCAGTTTG CAGGAGCTCT CGCAGCGACA AGAGATGGTT AAGAACATTA TATATGGAGC CACAGAGATC CTTACTGGAA CTGAGCTTGT TGAGCAGCTC GCTGTGTTGG GTCAAAAAAT GGGACTGAAA TAGAGAATAT CAGGTTTTTA AGGT 
Length1864
Protein Sequence
Protein Residue
Map Locationscaffold_7: 3931573.. 3933533
Download Sequence
A.thaliana
AGI-codeAT2G17980.1
DescriptionSec1/munc18-like (SM) proteins superfamily
TAIR curator summarymember of SLY1 Gene Family
Alias[ATSLY1]
Gene coexpression
MR
MR Locus Description
18.8149 Ahg471521 Defensin-like (DEFL) family protein
21.9089 Ahg484839
27.7669 Ahg935536
37.8946 Ahg475781 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein
66.4831 Ahg894920 Putative membrane lipoprotein
86.5332 Ahg898865
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression