Detail


ID : Ahg944939

Blast(Query):  A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|944939|scaffold_701168.1
Sequence
GAGCTTTTGT TATTGTTGAG ATGTTGTATA GCTCAGATCT ACTTGCCATT GTTGGTGCTG GTGAACAGGC TTCTCTATCC CCACGGCGTC TTTGTTTGTT CAAGACCACA ACGGGTTTAC CTCTTAGGGA ATTGAACTTT TTAACTTCTA TACTCGCTGT CCGTATGAAC AAGAAAAGAC TTGTTGTTGT GCTGCTAGAG AAAACATTCG TTTACGACTT GAATACTCTT GTCATGCTTG ATACTATCTA TACCGTGCCA AATCCTAAAG GTCTATCTGC ATTCTCTCCA TCTCTTGAAG GCTGCTACTT AGCTGTTCCA GCTAGTGCGA CGAAAGGGTC GGTTTTGGTG TATAACGTCA TGGATTTGCA GTCTCATAGT GAGATAGATG CACATCGTTC TCCATTGGCT GCGATTGCAC TCTCATCAAA TGGAATGTAC ATTGCTACAG CTTCTGAGCA AGGAACCTTG ATCCGAGTCC ATCTTGTTTC GGAAGCAACT AAGTCATATA GTTTCAGGAG AGGAACATAC CCATCTACTA TATACTCACT GTCTTTTGGA CCATCGACAC AGCTTCCGGA TATATTAATT GCAACGAGTT CTTCAGGCTC CATTCATGCC TTCTCTTTAA GTTTGGCCAT AAACCAAAGA AGCAAAAGGT CTACCAGCTT TCTTGGATCA GTTCTTCCGG ACAGCGTGAG TGATGCACTA GATCCAGCTC ATCATCATGT GCTTCAAAAC GCAGTTTCTT CCGGGATTAG AAGTTATGCA GTGGTTAGGA AGATAGACAA ACTTGAAGGA ACATCATCTC CATCTCAGTT TACATCTCTT AGAGCAACGG TATCGGTGAT TACTTATAAC GGGTATTTCC AGGAGTATAC GCTAAGTATC AATAACAAGA ATGAGTCTTT ATGGACAATG GAACGTGAAT TCAACCTCTT CTCAATAACA ACCGGGTGAT GTATAAAATC AAATACCAA
Length979
Protein Sequence
Protein Residue
Map Locationscaffold_7: 4449364.. 4451016
Download Sequence
A.thaliana
AGI-codeAT4G30510.1
Descriptionhomolog of yeast autophagy 18 (ATG18) B
TAIR curator summary
Alias[ATATG18B][ATG18B][ARABIDOPSIS THALIANA HOMOLOG OF YEAST AUTOPHAGY 18 (ATG18) B][homolog of yeast autophagy 18 (ATG18) B]
Gene coexpression
MR
MR Locus Description
23.4094 Ahg902874 Cysteine proteinases superfamily protein
79.0443 Ahg484673 NAC domain containing protein 3
82.5591 Ahg477812 RING/U-box superfamily protein
84.0952 Ahg473164 Eukaryotic initiation factor 4E protein
90.4655 Ahg487900 RING/U-box superfamily protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression