Detail



ID : Ahg944951

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|944951|scaffold_701180.1
Sequence
TTCCTTTTCT CTCTCACACT TATGAAATTT TCTCGGGAAA ATATGAAATG GGTTTTTCCA GAAATCAAAA CAACTCAGAA TTTCCTCTCT CCTTCATCAC TTCCACGGCC ACCACCACAA GAACCACCGT TATCTCTCCG ATCCAACAAC GCAAACTTCG ATCTAAACAG CAAAATCAGT CCGAGTATTC TTCTCATAAT CATAATCCTC TCAATCATCT TCTTCATCTC TGGTCTTCTT CATCTCTTAG TCAGATTCCT TCTCACACCA TCAAGCAGAG ACAGAGAAGA TTACTTCGAC AACGTCACTG CTCTTCAAGG CCAGCTTCAA CAGCTTTTTC ATCTCCATGA TTCTGGAGTT GACCAATCCT TCATCGACAC GTTACCTGTT TTCCATTACA AGTCCATAAT CGGTCTCAAG AACTATCCTT TTGATTGTGC TGTTTGTCTT TGTGAGTTCG AAACAGAGGA CAAGCTCAGG CTTTTACCTA AATGCAGCCA CGCCTTTCAC ATGGATTGTA TCGATACTTG GCTTCTCTCT CACTCAACTT GTCCTTTGTG TAGATCTAGT CTCCTCTCTG ATCTCTCTTC TCACCAAGAT CCTCGTTCTT CTTTCCTCCT TGTTCTTGAG TCTGCGAGTG ATCATAGCTC CAGAGAGATT GGAGGAGATA GAGACAGTGC AGCTTGTGTG GCTGCCAATG ATGATAATGA TGTGTCTAAT GTTCATTCAC ATTCCAATTC TCATCTTGGT TTTGTCGGAA ACAATGATCT TGGATCACAC CGGTTAGATT CGGGTCATGG AGATCAATAC CCTGATGGTG AATTGGGTGG TTCGGTTGGA AAGGTTGTTC CTTTTGCAGT TAAGCTTGGG AAATTTAGGA ATATAGATAT TGGTGAAGGA ACTAGTAGCA ACAACAACAT TGGTAATAGT AGTAGTTTAG ATGAAAGGAG GTGTTTTTCA ATGGGATCAT ATGAGTATAT AATGGATGAA GAAACGGCTC TTAAAGTTCA TGTTTCAACT AAGAAACAAT CAAGCAAGAA CCGTGGCTTG CCCGGTCATA GGACCGCCAT GTCCGAATGC GGGTTTGATC CAACAGGGAG ATTGAAATTC AATGGGAGCG GATCGATGAG GATCGCGGAA GAAGCGACCG AGAAGAATGT AGTAGAAAGA GAGAGCTTTT CGGTATCTAA AATTTGGCTA AGAGGGAAGA AGGAGAAGCA TAGTAAAGTT CAAGGAAAAG AGGATAGTTC ATTGGTTTCG TCTTCTTCGG GAAGAGCATT CTCTTTCAGG TTATCGAACC AGCGTAATCC TCCCGATACG AAGAATGAGA GTGGTTGCGA AGAAGAGAAT CAAAAGTGCG AAAACTCAGA ATCGTTGGAG ACTAAAACAC CATCTTTTGC TAGGAGGACT ATGCTTTGGC TTGCTGGGAG ACAAAACAAG GTTGTTCATT CTTCTTCTTC AACTAATGTC TAGTTTCTCT ATTTTTCCTT TTCA 
Length1494
Protein Sequence
Protein Residue
Map Locationscaffold_7: 4493299.. 4494801
Download Sequence
A.thaliana
AGI-codeAT4G30400.1
DescriptionRING/U-box superfamily protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
8.88819 Ahg939208 RING/U-box superfamily protein
31.5278 Ahg478632 Eukaryotic aspartyl protease family protein
32.249 Ahg921505 Leucine-rich repeat protein kinase family protein
41.1339 Ahg494417 GDSL-like Lipase/Acylhydrolase superfamily protein
46.0109 Ahg495427 Transducin/WD40 repeat-like superfamily protein
46.669 Ahg490527 glycerol-3-phosphate acyltransferase 8
47.3286 Ahg479077 delta tonoplast integral protein
56.921 Ahg332502 Major facilitator superfamily protein
57.3934 Ahg483441 Protein of unknown function (DUF1685)
58.9576 Ahg488379 myb domain protein 16
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression