Detail



ID : Ahg945215

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|945215|scaffold_701444.1
Sequence
CCGCCGAGAA TCGAGAAGCA GCAGCAATGG CCGACGTAGT TCAATACCGC CTCGAGCGGA TGGTTGACGA GCTTGATGAT CTAGAACGAA GAGGAATCTT CACTCGTGCA GAGATAGCTG AGATCGTGAA GCAGCGCCGT AAGTTCGAGT ACCGGCTAAA GCGTCCAAGC CCTCTCAAAG AAGATTTCAT AGCCTATATT GACTATGAGG TTAAGCTCGA TGAGCTCCGC CAGCTACGGA GGAAAGCGGT GGCTTATGAG TCTAAGAAGA GAAAGAAGAA ATCGGTTTCT GATTTCGCCG GTGTGGCTAG GATTGTTGAG ATTTATAGAT TGGCGACTAT GAGGTATAAA GGGGATATCA ATTTGTGGTT TAGGTATCTC GAGTTTTGTA AACAGAAGAG GCATGGAAGA ATGAAGAAGG CTTTGGCTCA AGCAATAAGG TTTCATCCAA AAGTGGCTGG AGTGTGGATA TATGCTGCGT CTTGGGAATT TGATAGAAAC TTGAATGTTA CTGCAGCTCG TGCTCTCATG CTGAATGGGC TGAGAGTTTG TTCAAACTCT GAAGACTTGT GGGTGGAGTA TCTGCGGATG GAACTTACTT ACCTAAATAA GCTGAAAGCT CGTAGAGTTG CCCTTGGTGA AAGTAAAGGT AGTTTGGTGC GTGACACGAA ATCCGTCGAG GATGAGAAAT GGAAAGATGA AAACAAAGAG TTGTTTATGT CGCTAGATGA GAAAGAAGGA AATGAAAAAG AAGAGGATGG GGAGGAGGAC TCTAATGTTG AAGATGCTAA GGATGTGACT GAGAAAGTTG ATGTTTTTCG GGAAAAAGGG TCCAATGTTC TTCAGACAAT CTATAGTGGT GCCATTGAGG CTCTTCCATC TAGTTTTGAC TTGAGGAAGC GTTTTTTGGA GATTCTAGAG GCAACGGACT TGGCGCATTC AGATGAAATC CGCAATACGA TTCTTAGTGA CCTGAAGCGT GACTTTTGCA AGGAACCTGA ATACTGGAAT TGGCTTGCAA GACATGAAAT GAGTGGTTGT ATTAGCAAAG AGACTGGCCT AGAGTTTTCT AATCCTCAAA TGCAAAAGGC TATTCAGGTT TTTGAAGAGG GCTTGCAAAC TGTTACTTCA AGTTCTATGT TTGAGATTTA TATAAAGTTT TTGATGGAGG CTATTGCACA GTCAAATGGT GACGATGATG AAATTTCTCC TTCGTCTAAT TCTATTGGGG ACTGCATTTC GCATGTCATA AACGTGTACC AAAAGGCTGA TGAAACCGGG TGTTTGACTG AGGAGCTTGC TGATGAATAT GTTTCTCTGT ATTTGAAACT GGGAAAGACT CATGAAGCTC AGAAGCTAGC AGAAAAATTT TGCTCTGGAA AATTTGCTGG ATCAGCTAAG TTGTGGCTTT CAAGAGTTTC CATTGAAATA AGATCACTTT CAGGGAACTC AACTCCTAGT AAAGCAGATT TGCAGACAGT TTTTGAGCTC CTTTCAAATG CTTTGAGGAA AGTACCTATC TCAGAATCTG AGAGCTTGTG GCTAATGGCT TTTAAATTCT TTGCTCATCA GAAAACTTAT TTGGACAAAC TTGTAGAGAT GTCCATCCTA TTAGCAACCA AAAGCCATGG GAGCAACCAT GTGTTTTCAC TTTCTTCCAC GGTGGTGAAA TTTGTTCTTG AAACAAAAGG GGGCCACAGT GCGAGGAAGA TATACAAGAG GTTCTTGGCT CTTCCTGGTC CCAGTCTTGT TCTATACAAA GATTGCATTG AAATAGAGAC AAACCTTATA TCAGTGGGTG ATAAAGATGG TCTCAGTAAT GCCCGGAAGC TGTATGATTC TGCTGTTGCA AGTTACAGTC AAGGCGTGGA GCTGTGGAAG AATTACTACT TATTGGAGAC AAAGATGGGA ACATCAGAGA CGGCCAATGG AGTGTATTGG CGGGCGAGAA AGACTCTGAA GGAATCGGCG GATTTCATAG TTTGATCTGA TTTGTAGGTA GGTTG 
Length2005
Protein Sequence
Protein Residue
Map Locationscaffold_7: 5470408.. 5473109
Download Sequence
A.thaliana
AGI-codeAT4G28200.1
Description
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
4.24264 Ahg492148 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
5.91608 Ahg491623 Class II aminoacyl-tRNA and biotin synthetases superfamily protein
6.48074 Ahg477959 ARM repeat superfamily protein
8.24621 Ahg477645 H/ACA ribonucleoprotein complex, subunit Gar1/Naf1 protein
9.79796 Ahg496421 Protein of unknown function (DUF3223)
11.4891 Ahg479925 KRR1 family protein
13.0384 Ahg902880
14.8997 Ahg483090 Transducin/WD40 repeat-like superfamily protein
15.906 Ahg936861
17.1464 Ahg495092 radical SAM domain-containing protein / GCN5-related N-acetyltransferase (GNAT) family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression