Detail



ID : Ahg945237

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|945237|scaffold_701466.1
Sequence
TGTGAAAATC TCCTATCTTC CGATATGAGA TTTGTGACAT CGTCTGCGGC CGGTGAGATT TTCCGACGTG ATGAGCTTGT AGTGAGACGG CTCTTGAGCC AACGTCTGTG CTCTAAACTT GTTAATACCT TCTCTGAAAC TGAAACCAAA TTGAGATCGC TATGTGAGGA TTCAAATCCT CAGCTCAAGA ATGCCGTTTC AGTTTTCCAG CAAGCAGTCG ACTCCGGTGG CTCTCTTTCT TTCGCCGGAA ATAATCTCAT GGCAACGCTG GTACGCTCTA GAAACCACGA AGTAGCATTT TCATTTTACC GCAAGATGCT TGAGACTGAT ACATTCATCA ATTTCGTGTC GCTGAGTGGG TTACTTGAAT GTTTTGTGCA AATGCGTAAG ACTGGTTTTG CACACGGGGT TCTCGCATTG ATGTTAAAGC GTGGGTTTGC TTTCAATGTG TATAATTATA ATATCCTCTT AAAGGGTTTA TGTAGGAATC TGGAATTTGG TAAAGCTGTT AGTTTACTGA GAGAAATGAG ACAAAACTCT CTGATGCCTG ATGTTGTTAG CTACAACACG GTTATTCGAG GTTTCTGCGA GGGAAAAGAG CTGGAGAAAG CATTGCAATT AGCTAATGAA ATGCAAGGCA GTGGCTGTTC TTGGAGTTTG GTGACTTGGG GGATTCTGAT AGATGCCTTT TGCAAGGCTG GTAAGATGGA TGAGGCGATG GGCTTGCTCA AAGAAATGAA ACATAAGGGT TTAGAGGCAG ATCTTATTGT GTATACTTCT CTGATTCGAG GGTTCTGTGA TTGTGGTGAG TTAGATAGAG GGAAGGCGCT ATTCGATGAG GTTCTGGAAA GAGGAGATTC TCCCTGTGCA ATTACATATA ACACGCTTAT TCGAGGTTTT TGCAAGTTAG GACGGTTGAA AGAAGCCTCA GAGATTTTTG AGTTTATGAT GGAGCGTGGA GTTCGCCCAA ATGTTTACAC GTACACGGGT CTAATTGATG GCCTTTGCGG TGTAGGTAAG ACTAAGGAAG CCCTGCAACT TTTAAATCTG ATGTTAGAGA AGGATGAAGA ACCAAATGTT GTGACATATA ACATTATTAT TAACAAGCTG TGCAAGGATA GCCTTGTAGC GGATGCTTTA GAAATTGTAG AGTTAATGAA GAAGAGGCGT ACAAGACCTG ATAACATAAC ATACAATAGT TTACTGGGAG GACTCTGTGC CAAAGGTGAC CTAGACGAAG CAAGTAAGCT TCTCTATTTA ATGCTGAAAG ATAGTAGTTA TACGGATCCA GATGTTATAT CATTTAATGC GCTAATCCAC GGGTTGTGCA AGGGAAACCG TCTCCATCAA GCTTTAGATA TTTATGATTT GCTGGTCGAG AAATTGGGTG CTGGGGATAT AGTTACCACT AATATATTGC TTAACAGCAC TCTCAAGTCT GGAGATGTAA ATAAGGCAAT GGAACTTTGG AAACAAATAT CTAATTCCAA AATTGTTCCA AACTCAGATA CATATACTAC TATGATTGAT GGGTTTTGCA AAACTGGCAT GCTTAATGTT GCTAAAGGAT TGCTTTGCAA AATGAGACTG TCTGAGCTAC AGCCTAGTGT TTTCGACTAC AACTGCCTAC TGTCATCATT ATGCAAAGAG GGAACCTTAG ACCAGGCATG GAGATTATTT GAGGAAATGC AGCGTGATGA CAGTTTTCCA GACGTGATTT CTTTCAATAT CATGATTGAT GGAAGTCTTA AAGCAGGGGA TATTAAGTCT GCAGAATCAC TTCTTGCGGG GATGTCTCAT GCTGGTCTTT CCCCTGATTT ATTTACTTAT TCGAAGTTGA TAAATAGGTT CCTGAAACTT GGATATTTAG ACGAGGCTAT CAGTTTCTTT GACAAAATGA TTGATAGCGG TTTTGAACCT GATGCTCATA TTTGCGATTC TGTATTGAAG TATTGTATTT CACAGGGAGA AACAGACAAA TTGACGGAAT TTGTAAAAAA ACTGGTGGAT AAAGATGTTG TCCTTGACAA AGAACTTACG TGTACGGTCA TGGATTACAT GTGTAGCAGC TCAGGAAACA TGGATATTGC AAAACGGTTG CTAAGAGTGG CAGATGATAA AGAAGAAGGG GATAAGTGGG GTGCATAGTC ATGCTCACTT ATGCTAACT 
Length2169
Protein Sequence
Protein Residue
Map Locationscaffold_7: 5530033.. 5532198
Download Sequence
A.thaliana
AGI-codeAT4G28010.1
DescriptionTetratricopeptide repeat (TPR)-like superfamily protein
TAIR curator summary
Alias[RPF5][RNA processing factor 5]
Gene coexpression
MR
MR Locus Description
5.09902 Virus3160
29.9333 Ahg917759 pseudo-response regulator 3
37.9473 Virus3781
74.8331 Ahg316646
79.6681 Ahg948476 Major facilitator superfamily protein
97.0567 Ahg324617 embryo defective 1703
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression