Detail



ID : Ahg945357

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|945357|scaffold_701586.1
Sequence
AGATCTGAAA ACAGTGAAAG ATGCGACGAC GACCAGGAAT CGGAGGATTG CAAAAGGCCG CAGCTGCCAG GGATCAGTAC CGGTTACTGG GAGAAAATGT AGCCAAGTTA CGTACTGATA TGATGAAAGA ACAGCTCGCA ACGTTCCGGT CCCAGCTTGA AGAGTTCGCT CGTAAACACA AGAATGACAT TCGTAAGAAT CCAGCCTTCA GGGCTCAATT CCATGAAATG TGTTCTAACA TTGGTGTGGA TCCTCTTGCT TCCAACAAAG GTTTCTGGGC TGAGCTCCTT GGAATTGGTG ACTTCTACTA TGAACTTGGA GTTCAGATTA TTGAGGTTTG CATGCTTACA AGGTCACACA ATGGAGGTTT GATCAGCTTG CAAGAGCTCT GCAACCATCT TCGTCTGAGA AGGAAGAAGG ATCGTGAAGC TGTGACTGAA GATGATTGTC TTCGAGCTAT TAGCAAGCTT AAGGTATTGG GTAGCGGATT TGAGGTTATC ACAATTGGCA AGAAAAAGCT TGTCCGTTCT GTACCCACGG AGCTGAACAA AGACCATAAC CAGATCTTGG AGTTGGCTCA GGGCCAAGGC TTTGTGACTG TGGAAGAGGT ACAAAGACGC CTCTCATGGA CATCTGGTCG GGTTATAGAT GCTCTCGAAA CTTTGTTAGA AGAGGGCCTT GCAATGATCG ACAACGGCCA TAAAGACGGA AAGTGTCGAT ACTGGTTTCC CTGTGTTTCT TCTGTTTACT CATACATCGG ATCTGATACT TAACCTGGTA CATGCTCTGT TTT 
Length793
Protein Sequence
Protein Residue
Map Locationscaffold_7: 5950630.. 5952135
Download Sequence
A.thaliana
AGI-codeAT4G27040.1
DescriptionEAP30/Vps36 family protein
TAIR curator summary
Alias[VPS22]
Gene coexpression
MR
MR Locus Description
18.9737 Ahg497264 Protein of unknown function (DUF803)
35.7071 Ahg477906 peroxiredoxin IIF
35.8608 Ahg492548 cysteine-rich RLK (RECEPTOR-like protein kinase) 5
36.9459 Ahg355923
37.1887 Ahg497488 eukaryotic translation initiation factor 2
47.697 Ahg493763 pfkB-like carbohydrate kinase family protein
53.7773 Ahg496425 glutathione S-transferase tau 9
66.2193 Ahg313324 Mediator complex, subunit Med10
71.3302 Ahg485019 ubiquitin-conjugating enzyme 13
72.7461 Ahg898845 thylakoid lumenal 17.9 kDa protein, chloroplast
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression