Detail



ID : Ahg946108

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|946108|scaffold_702337.1
Sequence
TCAGTCTCAT ATAGTAGCAA AGATGGTTGC AGAACGATAC ACAGTCGATT TGAATAAGCC ACTTGTCTTT CAGGTTGGTC ATCTTGGCGA AGAATATCAG GAATGGATTC ATCAACCTAT TGTATGCGTA GAGGGTCCTC GTTTTTTTGA AAGTGATTTT TGGGAGTTCT TGACTCGCAC GGTTTGGTGG GCAATCCCAA CAATCTGGCT TCCAGTTGTT TGCTACGTTC TTTCAATATC GGCGAGGAAG GGACTTACAA TTCCCCAGAT CGGTTTAATA GTTGCCTTTG GTGTACTCAC ATGGACACTT CTCGAGTACA CGCTTCATCG TTTCCTTTTC CATATCCAAA CCAAGAGTTA CTGGGCAAAC ACTGCACACT ATCTTCTTCA TGGATGCCAT CACAAGCACC CACAAGACGG CCTTCGTCTT GTTTTCCCTC CTACCGCTAC AGCTATTCTC TTGGTTCCAC TATGGAAGCT TCTCCATATC TTAGCTACTC CTGCTACAGC ACCTGCTATT CTTGGAGGCA TATTGTTTGG CTATGTGATG TATGATATTA CTCATTACTA TCTACACCAT GGTCAACCTA AAGAACCAAC CTTTAAACAT CTGAAGAAAT ACCACCTGAA TCATCACTTT AGGATTCAGG ACAAAGGATA TGGAATCACT TCCTCTCTAT GGGACAAAGT CTTTGGAACA CTTCCCGGTA TAAAGGCCGC CCAGAAGAAA AGCTAAACCG GATTTCTGTT TGCCAT 
Length756
Protein Sequence
Protein Residue
Map Locationscaffold_7: 8932740.. 8934040
Download Sequence
A.thaliana
AGI-codeAT4G20870.1
Descriptionfatty acid hydroxylase 2
TAIR curator summaryencodes a fatty acid hydroxylase, required for the AtBI-1-mediated suppression of programmed cell death.
Alias[ATFAH2][FAH2][ARABIDOPSIS FATTY ACID HYDROXYLASE 2][fatty acid hydroxylase 2]
Gene coexpression
MR
MR Locus Description
17.2047 Ahg933211 copper/zinc superoxide dismutase 2
29.2233 Ahg484417 tonoplast intrinsic protein 2
30.545 Ahg476914 thylakoidal ascorbate peroxidase
33.8821 Ahg931036 adenylate cyclases
34.5977 Ahg474093 Calcium-dependent protein kinase (CDPK) family protein
37.9473 Ahg485020 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein
41.2311 Ahg478515 FASCICLIN-like arabinogalactan protein 18 precursor
47.4131 Ahg331870 Actin binding Calponin homology (CH) domain-containing protein
48.4355 Ahg926353 polygalacturonase 2
53.2165 Ahg473537 GDSL-like Lipase/Acylhydrolase superfamily protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression