Detail



ID : Ahg946121

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|946121|scaffold_702350.1
Sequence
AGAAGAAGAT GAACAAGCGA AAATGAAATC ACCAAAACCT CCGAATCTCT CTGATAAATC TCTTAAACCC AATTTCTTCT ACGGCCACCG TAAACCGTCA CAAAACCGCC CAATCGTATA CGGTGGTCTC TTCTCAACCC GCCAATCTCT ATCCAGAGAC TCACCCCAAT CTCCATCAAA CGCCGTCGCT CACCGAACAC CTTTCGATCT CCGCAAATGG GATCCAGAAA CCCATCTCCC TTCAGAAAGA TCTCCTTCTT CTCCGCAGTC ACATTCCACG GTGATCTCCG CCGCCTCCGA ACGTTTATCT CCGATCGCGA GATTCGTCCT CGACGCATTC CGCAAGAATC GTAACCATTG GGGTCCCTCA GTAGTCTCGG AGCTAAACAA ACTCCGCCGT GTAACGCCGA GTATCGTCGC CGAGGTTTTG AAATTAGGAA ACGATGCTAC AGCTGCGGCT AAGTTCTTTC ATTGGGCTGG TAAACAAAAA GGGTACAAAC ACGATTTCGC TGCTTACAAT GCTTTTGCTT ATTGCCTTAA TCGAAACGGA CATTTTCGTG CTGCGGATCA ATTGCCTGAG CTTATGGATT CTCAGGGAAG ACCACCGTCG GAGAAACAGT TTGAGATTTT GATTAGAATG CACGCGGATA ACAGAAGAGG TTTAAGGGTT TATTACGTTT ACGAGAAGAT GAAGAAGTTT GGGTTTAAGC CTAGGGTGTT CTTGTATAAT AGGATAATGG ATGCTTTGGT GAAAAATGGT TACTTTGATT TAGCTTTGGC TGTTTATGAG GATTTTAAAG AAGATGGGTT GGTGGAGGAG AGTACTACTT TCATGATCTT GGTTAAAGGG TTGTGTAAAG CAGGTAGAAT CGAAGAAATG CTCGAGATTT TGCAGAGAAT GAGGGAGAAT TTGTGTAAGC CTGATGTTTT TGCTTACACA GCAATGATCA AGACTTTGGT TTCTGAAGGG AACTTGGATG CAAGTTTACG AGTTTGGGAT GAAATGAAAC GCGATGAGAT AAAACCGGAT GTGATGGCGT ATGGAACACT TGTTGTGGGT CTGTGTAAAG ACGGTAGAAT TGAAAGAGGC TATGAATTGT TTATGGAGAT GAAGGGAAAG CAGATTTTGA TTGATAGGGA GATCTACAGG GTTTTAATTG AAGGGTTTGT TGCGGATGGG AAGGTCAGAT CTGCTTGCGA TCTGTGGAAG GATCTGGTGG ATTCTGGGTA CATAGCTGAT CTAGGGATAT ACAATGCTGT TATTAAAGGT TTATGTAGTG TGAATCAGGT TGATAAAGCA TATAACCTCT TCCAAGTTGC AATTGAGGAA GAACTAGAAC CAGATTTTGA GACTCTAAGT CCCATTATGG TTGCATATGT GGTGATGAAT AGACTAAGTG ATTTCTCCAA TTTGCTAGAA CGAATTGGAG AATTAGGACA CCCTGTCACA GATTACCTTA CACAATTTTT TAAATTGTTA TGTGCTGACG AAGAAAAGAG AACGATGGCT TTAGATGTCT TTGATATACT AAAGACTAAA GGTCATGGCA GTGTCTCTGT GTACAACATT CTTATGGAAG CTCTTTACAA GATCGGTGAT ATTCAAAAGT CCTTGTCACT TTTCTATGAA ATGAGGGAAT TTGGGTTTGA ACCAGATTCA TCATCTTACA GTATTGCACT TTGCTGCTTT GTTGACAAAG GGGATGTCCA AGAGGCTTGT TCATGTCATG AAAAAATCAT TGAGATGTCT CGTGTTCCTT CCAAAGCTGC TTATTTGTCT CTTACTAAAG GACTCTGCCA AATTGGAGAA ATTGATGCGG TGATGTTATT AGTCCGTGAA TGTCTAGGAA ACGTTCAAAG TGGTCCTATG GAGTTTAAGT ACGTTCTTAG GGTTTGTCAT GTATGCAAAG GTAGTAATGC CGAGAAGGTT ATGGAGGTAG TAGATGAGAT GAACCAGGAA GGTGTCTCTA TCAATGAAGT TATATACTGT GCAATTATCT CTGGTATGTC TAAGCATGGA ACAATAAAAG CAGCAAGAGA AGTCTTTGCA GAGCTGAAAA AGCGCAAAGT CATGACTGAG GCTGACATGG TAGTCTATGA TGAAATGTTA ATTGAGCAGA CAAAGAAGAA GACAGCTGAT TTGGTGCTTT CAGGGATCAA GTTTTTTGGT CTCGAATCAA AACTAAGAGC AAAGGGTTGC AGACTACTCG ATAACTAAAG TTTGGGTCTG ATAAATCATT 
Length2240
Protein Sequence
Protein Residue
Map Locationscaffold_7: 8984296.. 8986535
Download Sequence
A.thaliana
AGI-codeAT4G20740.1
DescriptionPentatricopeptide repeat (PPR-like) superfamily protein
TAIR curator summary
Alias[EMB3131][EMBRYO DEFECTIVE 3131]
Gene coexpression
MR
MR Locus Description
4.24264 Ahg948905 Protein of unknown function (DUF565)
13.0384 Ahg916754 Leucine-rich repeat transmembrane protein kinase family protein
39.4968 Ahg474093 Calcium-dependent protein kinase (CDPK) family protein
40.4722 Ahg930275 Plant protein of unknown function (DUF828) with plant pleckstrin homology-like region
47.6025 Ahg324761 Tetratricopeptide repeat (TPR)-like superfamily protein
63.498 Ahg492795 double-stranded RNA binding protein-related / DsRBD protein-related
70.8378 Ahg487923 L-Aspartase-like family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression