Detail



ID : Ahg946306

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|946306|scaffold_702535.1
Sequence
CAGAAAGAGA ATTGAAAAAA ATGAGTGCTT GTTCATCAAC AACTCCAGTA CCGATTCTGT CATTCACAGA GAGAGCTAAA TCTCTGTTGG AGATTCAACA AGCTCACGCC TTTATGCTCA AAACCGGTCT TTTTCACGAC ACGTTTTCTG CGAGCAAGCT TGTTGCCTTC GCTGCAACAA ACCCAGAACC CAAAACTGTC TCTTACGCTC ACTCTATTCT CAATCGAATC GAGAGCCCTA ATGGGTTCAC TCACAATTCC GTTATCAGAG CTTATGCGAA TAGCTCTACT CCTGAGATTG CTTTAACCGT GTTTCGTGAA ATGCTTCTTG GTCCTGTGTT TCCCGATAAG TATAGCTTCA CGTTTGTGTT GAAAGCTTGT GCTGCGTTTT GTGGGTTTGA AGAAGGAAGG CAAATTCACG GTCTTTTTAT GAAGAGTGAT TTGGTGACTG ATGTGTTTGT GGAGAATACT TTGGTTAATG TTTATGGAAG ATGCGGTTAC TTTGAGATTG CACGTAAAGT GCTCGATAGA ATGCCTGTGA GAGATGCTGT TTCTTGGAAT TCGTTGTTGA GTGCTTATCT TGATAAGGGT TTGGTGGAAG AAGCTCGTGC GTTGTTTGAT GAGATGGAGG AACGGAATGT GGAGTCTTGG AATTTTATGA TTTCGGGTTA TGCGGCTGCG GGGTTGGTTA AGGAAGCGAA AGAGGTTTTC GATTCTATGC CGGTGAAAGA TGTGGTTTCT TGGAATGCTA TGGTGACTGC TTATGCACAT GTGGGTTGCT ACAACGAGGT TTTAGAGGTT TTCAATAAGA TGCTGGATGA TTCAGCAGAG AGACCAGATG GTTTTACTCT TGTTAATGTT TTATCTGCGT GTGCTAGTCT TGGATCCTTG AGTCAAGGTG AGTGGGTACA TGTTTACATA GACAAGCATG GGATTGAGAT TGAAGGGTTT GTGGCAACAG CTCTTGTGGA TATGTATTCG AAGTGTGGGA AAATTGATAA GGCTCTTGAA GTGTTTAGAG CTACTTCAAA GACAGATGTC AGTACATGGA ACTCGATAAT CACGGGTTTG AGCGTCCACG GTCTTGGAAA AGATTCTTTA GAGATCTTCT CAGAGATGGT ATATGAAGGT TTTAAACCAA ATGGTATCAC ATTTATTGGT GTTTTGTCGG CCTGCAATCA TGTGGGTTTG TTAGACCAAG CTCGCAAACT TTTTGAAATG ATGAATAGTG TGTACGGGAT TGAGCCAACT ATTGAACACT ATGGTTGTAT GGTCGATTTG CTTGGTCGGA TGGGAAAATT TGAGGAAGCA GAAGAACTTG TGAACGAGGT TCCAGCAGAT GAGGCTTCCA TTTTACTAGA ATCTCTTCTT GGTGCCTGTA AAAGGTTTGG AAAACTGGAA CAAGCAGAGC GTATAGCAAA TCGGTTACTG GAGTTGAATC CACGTGAGAG TTCAGGTTAT GTTCAGATGT CAAACTTGTA TGCCTCTCAT GGTAGATGGG ATGAGGTTAT GGAGGTGAGA GGAAAGATGA GAGCAGAAAG AGTAAAGAAG AAGCCTGGAT GTAGCATGAT TGAAGTTGAC GGGGTCGTCC ATGAGTTCTT AGCCGGTGAA GGACTAAGAA TCGAATAAAA CCGGTAATTT CCAAAAATT 
Length1649
Protein Sequence
Protein Residue
Map Locationscaffold_7: 9888783.. 9890432
Download Sequence
A.thaliana
AGI-codeAT4G18840.1
DescriptionPentatricopeptide repeat (PPR-like) superfamily protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
12.3693 Ahg482061 embryo defective 1381
15.4919 Ahg941275 Protein of unknown function (DUF1005)
20.1246 Ahg482499 ubiquitin family protein
22.4499 Ahg916255 Zinc knuckle (CCHC-type) family protein
28.0535 Ahg890756 Pre-mRNA-processing-splicing factor
28.7228 Ahg476277 Pentatricopeptide repeat (PPR-like) superfamily protein
33.8821 Ahg951726 tRNAHis guanylyltransferase
35.6651 Ahg916985
47.9062 Ahg476805
48 Ahg350155 Thiamin diphosphate-binding fold (THDP-binding) superfamily protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression