Detail



ID : Ahg946752

Blast(Query) A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|946752|scaffold_702981.1
Sequence
GTTGTAGAAA AAAATCATAA AATGTCCGAG AATAATGATG ATACATATCA AGGTCATGAT CTCAAAACTA TCATCGAGAG AACAGCAGAA TTCATTGCCA AAAACGGGGC TGAGTATGAG AAGGAGTTCT TGGAGTCGCA TCCAAAACTC ACCTTTTTTG TTAGCTCAGA TCCTAATCAC GCATTTTACC AGGACAAGCT TATTGAATAC CGAAACGCAT CTCATGATCA TAATGCTACT GATGATGATT CTGATGATAA TGTTGAAAGT AGCAAAATCA TTCCGCCACC TCCAGGTGGT GTCACAAATC GTATCCAAGG AACAGCACTT TACGTTGCCA AAAAGGGTTT CAAGGCTGGG AAGATGCTCA TGCAATCTGA AGCCAACAAT CCAAAATACA ACTTTATGAG AAGATCAGAT CCTTATCACG CATTTTACAA GCAGAAGCTC GCTGAATACC GTTCTCAAGT GGATGATGAT TCTACTAATT CAGATGATAT TACTGATGAA GAAGTGGTTG CTGCAGCACG ACTCAGTGTT GCTCAGGCTG AGTATATATT CCTGCCTAAT CGACTACTTA TTTGTCTTCC TCATGGGATG AGAATCGAGG AGTTTAATAC TATGAAGCTC ACAGCACAGT TTGTGGCGTG GTATGGTGGT GCTTTTTGGT TGTGTTTGAA AAATAGAAAG ATTCTTCCTA AGTTTGAGTT TTTGGAACAA AGTGCTAAAT GGTACTCATG TTTCTCTAAG TTTGTTCTTG AGTTTTCCAA AGTACTAATG CCCCCGGCAG ATGTGAAACA AGAGCTGATT AATAGTGCTG ACTATGTGAC TACCATTGTT GACGCTTTTC TCCAACGTCT TCAATGGAGT GCTCTCCAGC ACCAACTATG GTTGGAGGGA GGAAAGAGGG CTATGCTTGA TTGGCATGTT TCTGTCACCA AAGATTTAAA GAACAAGGAC CTTGAGGAAC CAGATCCAAA GAGACAAAAG TTGCAAGAGT CAGGCTCGTC TACAATCAAG GTTTCTGTTC CAAATGCTGG TGGTGGTGGG AAAGTCATTG AGATCACAGT GCAGTCGTTA TCGGAAAACG TGGCGAGTTT CAAGGAGAAA ATAGCTGAGG AGATTCAAAT TCCAGCAAAC ACACACAAGT TAAGTGGAAA AGCAGGGGTT TTAGACGACG ACAACAAGTC ACTTGCACAT TACAATGTTG GAGTAGGAGA TACCCTAACA CTGTCTCTGT GACAAACGCT TGTGGGAAAT AA 
Length1262
Protein Sequence
Protein Residue
Map Locationscaffold_7: 11968524.. 11972059
Download Sequence
A.thaliana
AGI-codeAT3G27600.1
DescriptionSWAP (Suppressor-of-White-APricot)/surp RNA-binding domain-containing protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
22.9565 Ahg482468 Pentatricopeptide repeat (PPR) superfamily protein
34.4674 Ahg942338
39.2301 Ahg899887 Pathogenesis-related thaumatin superfamily protein
57.7754 Ahg938998 lectin-receptor kinase
68.5201 Ahg478087 Heavy metal transport/detoxification superfamily protein
84.463 Ahg911073 F-box family protein
85.8021 Ahg929330
87.1321 Ahg902925 Tetratricopeptide repeat (TPR)-like superfamily protein
95.4673 Ahg488314
95.9792 Ahg950917
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression