Detail



ID : Ahg946753

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|946753|scaffold_702982.1
Sequence
GGTTTCTTAT TGTAGAAAAA ATGCCCAGTT CGACGCAGAA TGAATTGCAA TCAGAGCAAA ACAACTCCGA AGCAACGAGT ATCGAAACCA TCCAGCCACC TCTAGATATC ATAACTAGAA CTATTATCGA AAGCACTGCA CGTTCTGTTT CCAAAAACGG CTTGGAGCTT GAGAAAAAGA TCATTGCCTC TTCGACTGAT CCAAGATTCA ACTTCTTGAG GAACACGGAA GATCCTTGTC ACGGATATTA CAAGCGAAAG CTTGCTGAAT ATTCTGCTCA GAATCAAGAT GATTCTACAA ATGAACCAAA CATCAAAATC TTTCACGCAC CTAAAGATGT ACCAACTACA AGTATTGTCG ATACAACAGC GCGTTTGGTT TCCAAATTTG GGTTGGAGTT TGAGATGATG GTTAAGGAAT CTAATACAGA TGATGAAAGA TTCAACTTCT TGAAAAGCTC TGAAGATCCT TATCACGCAT TGTACAAGCA AAAGCTTGAT GAATACGCAT CAGATCCTCG TGACGAATAT TATCAGCGCA AGATTGCTGA ATGCTACGTT CAGAATCGAA ATGGAGCTAC TGATGTTTCA TATCCTATGG ATATCAAAAT CTTTCATGCC CCTCCAGATG CCCAAACTCC AGCCATTGTC GACAGAGTGG CATTTCTGGT TTCCAAATAT GGGTGGCAGT TTAAGATGAT GGTCATGGCC TCTAATACAA ATGATGCAAG ATTCGACTTT CTTATGAGCT CACCAGATGT TGACCCTGCT CAAGCTTATT ACCAGAGAAG GGTTCAGTCT CAAAGACTTG ATCTGCCTAA TTTTCTAGAT TGTAGAGTTC TTGAAGGGAT GACGCTCGAG GAGCTTGATA CCGTTAAGGT CACAGGGCAG TTTGTGGCGT GGTATGGGGA TGTTTTTCGT GGGAAACTGA TGGAAAGAGT GATGATGAAC CATCAGTTTG AGTTTATGAA GCAAACTGAT TACAGGTTCT CTTTCTTCAA CGAGTTTGTT GTTGGGTATT CGCAAGTATT AAATCCTCCC AAATATTTGA AAGATAAGCT GAATAACAAT GCCGCCTATA TGACCGCCAT TCTTGAGGCT TTTCTCGAAC GTATTCTATG GGATCATGTT CAGGAGCTTA AATGGCTTGA TGGAGGGGAG AATTCTATGA TTGAATGGCA TAACTCTGCG TCCAAAGATT TTGTGGAGGA TCATGAGTTG CTACCTATGC TTGAAATGTC TCCTCCTGCA CCACTTCCTC CACAGAAGAG ACCAGAGTTG GATGAGTCAG CCCTTGTTCC ACTTGAGCCA GAAGACCAGT TTCTTGCACA ACATGAGGGT TTGTCTATAA TCAGGGTGAT TTGTGTTCCC GACGGGCAAG TAATTAAGAT CACAGTGCAG TCGTTGTCCG AAAACGTAGC AAGTTTGAAG GAGAAAATAG CTGAGGTGGT CCAGATTCCA GCAAACAAAC ACATGTTAAG TGGAAATAGA GCGGTTTTAA AGGACAATGA TAGGTCACTT GCTTATTACA ATGTGAAATC AGGAGCTATC TTAATACTGG ACGTGGTCTG AGACAAAGAG ATGGACACAA A 
Length1591
Protein Sequence
Protein Residue
Map Locationscaffold_7: 11970509.. 11972164
Download Sequence
A.thaliana
AGI-codeAT4G15590.1
Descriptiontransposable element gene
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
2 Ahg359027
9.48683 Ahg950240 Ubiquitin-like superfamily protein
11.8322 Ahg939799 Putative membrane lipoprotein
12.7279 Ahg905266 ankyrin repeat family protein
13.6015 Ahg924298 Uncharacterized protein family (UPF0016)
13.784 Ahg492863 Calcium-dependent lipid-binding (CaLB domain) plant phosphoribosyltransferase family protein
13.8564 Ahg329654 Defensin-like (DEFL) family protein
17.1464 Ahg951049 F-box family protein
17.4929 Ahg945826
20.4939 Ahg894540 protein kinase family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression