| Annotation |
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| Description | jgi|Araly1|946817|scaffold_703046.1 |
| Sequence |
TGGTTAACGA TAGATTTGGG TGATGGGAAA ACAGAGAATC TCTGAAGGGA AGAAAGAGAG CAAGGTTTTG GAAGATGAGA TAAGCTATTT GGTTGAGAAA CTGAATGAGT TAAAGTCTCC AAAGGTTAAG GACATGGAAG CTAGAAACTT CAGACATAAT ATTGATAAGC AATCCCAGAA GCATTGCCAA CAAGCCATTG GATTCTCATC AACGAATCCT AACATCCGCT GCGATACGCT GTCCCAGCAG CTGTTCTATC CCAGAAGCCA CTTTTCAAGA CATTGGCGTC GGAGTGTCTT AAAAAAGAAG TGATGTTTAA TGGCCAGACA TCCGCT |
| Length | 336 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_5: 12337266.. 12337810 |
| Download Sequence |
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| A.thaliana |
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| AGI-code | AT3G23780.1 |
| Description | nuclear RNA polymerase D2A |
| TAIR curator summary | This gene encodes the second largest, catalytic subunit of the nuclear DNA-dependent RNA polymerase IV (aka RNA polymerase D). The NRPD2 protein is found at nuclear foci that overlap or are adjacent to chromocentromeres but are not fully coincident with chromocentromeres. The loss of NRPD2 leads to the loss of cytosine methylation at pericentromeric 5S genes and AtSN1 retroelements but has no discernible effect on centromere repeat methylation. This suggests that Pol IV primarily affects facultative heterochromatin rather than constitutive heterochromatin. |
| Alias | [DMS2][DRD2][NRPD2][NRPD2A][NRPE2][OCP1][DEFECTIVE IN MERISTEM SILENCING 2][nuclear RNA polymerase D2A][OVEREXPRESSOR OF CATIONIC PEROXIDASE 1] |
| Gene coexpression |
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| MR |
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| RNA-seq |
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Seasonal expression (July 2011 to June 2013) |
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| The four seasons |
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| Growth Chamber expression |
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