| Annotation |
|---|
| Description | jgi|Araly1|946898|scaffold_703127.1 |
| Sequence |
CTTCACAGGT TTTAGAGGAA GATGAATTAT ACGAGATTTG ACCCCAAGGT CCAGCTTATA CTTGCAAAGG CTCGAACACT TGCCATCGTA TCGTCACATG TTCAAGTAAC TCCTCTGCAT CTCGGAGTTG GTTTGATTTC TGACAAGACT GGTGTTTTCT ATCGAGCAAT CACCACTGCA GGAGGAAGCG AACTCTTGGC TCAGTCAGCT GTCAAAGTCA TCAAACAAGC CTTAAAAAAG CTCCCAAAAC AGGTTCCTCC ACCAACTGGA GCCATTCCTC GATACCCAAG TCGTAAGAAT CTTCCAAAAC AGACTCCTCC AATATCGAAT GGGGCCATTC CTCAATATCC AGGTCTTAAC ATACCTCAAA ATCCCATTCC CTTCTTAACT AGAACCATTC CTCAAAACAA TGCAAGTCTT GTTATGGTCT TAAATCGTGC ACAAACGAAG CCCGGGGAGA CCAGTGTGGG AGTAGAGGCA TTGGTGATTA GTCTTCTTGA TGATTCTCAA ATCAGGGATT TGTTGAAAGA AGCTGGTTCT GTACCAGAGA AGGTTAAGTC TGAGGTGGAG AAGCTTGGTG GCGAGGTAAA CCTTCAGGCT TTGAAGACTT ATGGGATAGA TTTGGTTGAG CAAGTAGGTA AGCTTGATCC TGTCATTGGC CGAGACAAGG AGATTAGAAG AGTTGTTGGG ATTCTCTCAA GGAGAACCAA GAACAACCCC GTGCTTATTG GTGAGCCAGG TGTTGGAAAA ACTGCTGTGG TTGAAGGTTT GGCTCAAAGG ATATTGAAAG GAGACGTGCC TATCAATCTT ACCGATGTAA AGCTCTTTTC CTTGGACTTG GGTGCAATGG TTGCCGGAAC AACACTACGT GGACAATTCG AAGAAAGATT GAAGTCGGTC TTGAAAGAAG TTGAGAATGC TCAAGGCAAA GTTGTTCTCT TTATCGATGA GATCCACATG GCTCTTGGTG CTGGAAAGGC AAGTGGCTCC ACGGATGCTG CTAATTTGCT TAAGCCTATG TTAGCAAGAG GTCAGCTTCG TTGCATTGGT GCTACTACGC TTGAGGAATA CCGAACACAT ATCGAGAAAG ATGCTGCATT CGAGAGAAGG TTCCAACAAG TGTATGTAGC TGAGCCTAGT GTCCCTGACA CTATCAGTAT TCTTCGAGGG CTTAAAGAAA AATATGAAGG ACACCATGGT GTTCGTATCC AAGACAGTGC TCTTGTTGTT TCTGCTCAAT TGTCTGCGCG TTACATCACT GCTCGACGTT TACCGGATAA GGCAATTGAT TTGGTTGATG AGTCTTGTGC ACATGTGAGA GTCCAGCTTG ATAGTCAACC AGAAGAAATT GATTACCTTG AAAGAAAAAC AATGCAACTA AAGATAGAGA TTCATGCTCT CGAAAAGGAG AAGGACGACA AAGCTAGCGA AGCTCGCCTA GTCGAAGTGA GGAAAGAGCT TGATGACTTG AGGGACAAGC TTGAGCCTCT TACAATAAAA TACAAGAATG AGAAAAGGAT AATTAATGAA ACTCGGAGTC TTAAACAGAA ACGAGATGAG CTCATGATTG CTCTACAAGA GGCTGAGAGA CAATATGACC TTCCTAAAGC TGCTGATCTA AGATATGGGG CAATTCAGGA AGTAGAATCC GCGATAGCAA AATTAGAAAA GAGTGTTAAA GATAACGTGA TGCTTACGGA AACTGTTGGG CCAGAGAATA TTGCTGAGGT AGTGAGCCGA TGGACTGGGA TTCCAGTGAC TGCACTTGAC CAGAACGAGA AGAAGAGGCT GATTTCTCTT GCTGATAGGT TGCACGAGAG AGTTGTTGGA CAAGACGAAG CCGTGAAAGC TGTAGCTGCG GCAATTCTAA GGTCAAGGGT TGGACTAGGA AGGCCACAAC AACCATCTGG TTCCTTTCTT TTCCTCGGTC CAACTGGTGT TGGTAAAACT GAGCTGGCTA AAGCTCTTGC TGAGCAACTC TTTTACGATG AAAACCTACT TGTTAGGCTT GATATGTCGG AGTATATGGA TAGATCCACT GTTAATAAAC TTATAGGGGC ACCACCCGGG TACATTGGTC ATGAAGAAGG TGGACAACTA ACCGAACCCG TGAGGAGACG ACCTTACTGT GTTGTACTAT TTGATGAAGT TGAAAAGGCC AATGTTACTG TATTCAACAC GCTACTTCAA GTGTTAGAAG ACGGGAGATT AACCGATTCG CATGGGAGGA CAGTCGATTT CAAAAACACA GTGATCATAA TGACTTCTAA CCTTGGTGCT GACCACCTTA TTTCAGGGCT TACTGGTGAA GTGACAATGC AAGTGGCTCG AGACAACACA ATGAAAGAGG TGAAAAAACA TTTCAGGCCA GAGCTGTTAA ACAGATTGGA TGAGATAGTG ATGTTTCATC CTTTGTCCCA CGAGCATTTG ACAAAAATTG TTCAACTCCA AGTGAATAAT GTTGCTAATC GTCTTGCTGA GAAAGGTGTA TCTATGACTG TATGCATTGG ACTACATTTT AGCAGCGAGT TACGACTCGA GAGGAATGTG GTCACAGATA TATCGATGAT GATTGTACGA GAAGAAATCG ATGACGACTC CATTGTGTGC ATTGATGTAA ACGTGGATAA AACTGATCTT GTCTACCAAA TAGATGAGAA TGTGGTTGCG AAGAAGACAG AGCAAACGTC AGATGTTGTG ATTCATTCAC GGAATAAGAG GGGAAGAAGC AATGAAGAAA CTTTAACCAA AAAAATAAAA AGTGAAGTCA TAGTGATAGA TTGAAGAATG ATCAAGGATT GAAAGT |
| Length | 2806 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_7: 12861987.. 12877891 |
| Download Sequence |
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| A.thaliana |
|---|
| AGI-code | AT4G14670.1 |
| Description | casein lytic proteinase B2 |
| TAIR curator summary | This locus was originally annotated as encoding ClpB2 (also referred to as Hsp92.7), which belongs to the Casein lytic proteinase/heat shock protein 100 (Clp/Hsp100) family. However, according to Lee et al. (2007, Plant Journal, 49:115-127), there is no evidence for expression of an appropriate-sized mRNA from this locus. Re-annotation of the genome indicates that this locus potentially encodes a 68.8-kDa protein, containing only the N-terminal two thirds of the originally predicted open reading frame. This locus contains a 626-bp deletion in WS ecotype compared with the Col ecotype, which eliminates residues 1-86 of the predicted protein. |
| Alias | [CLPB2][casein lytic proteinase B2] |
| Gene coexpression |
|---|
| MR |
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| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
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| The four seasons |
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| Growth Chamber expression |
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