Detail



ID : Ahg946935

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|946935|scaffold_703164.1
Sequence
TCTTCTTCCT CCGATCACCA CCATGTGTAC GTTAGAGAAA CGCGGCGATC TCTTCCTCCT AACCCTAACC GGCGACGGCG AACACAGATT CCACCCCGAC ACAATCGCCA CCATCCTCTC CCTTCTCGAA CAAGCCAAAT CTCAATCCAA ACGTGGATCC ATCCTCATCA CCACCGCTAA CGGCAAATTC TTCTCCAACG GCTTCGATCT CGCCTGGGCT CAAACCGCCG GATCCATAAC CGGAGCTGCA AACCGGCTTC ATCAAATGGT TGAATCCTTC AAACCGGTGG TAGCAGCGCT TTTAGATCTC CCTATGCCGA CGATCGCCGC CTTGAACGGC CACGCAGCCG CCGCGGGACT GATGCTGGCT ATAAGCCATG ATTACGTGCT CATGAGGAAA GACCGTGGGG TTCTGTACAT GAGCGAGGTT GACATCGGGC TTTCGATGCC GGATTATTTC TCGGCGTTGG TTAGGGCTAA GATCGGTACG AGTGCGGCGA GGAGAGAGCT GTTGTTGAGT GGGAAGAAGA TTAGAGGAGA AGAAGCGGTG GGTTTGGGGA TTGTTGACTC GGCGGCGTAT GATAGTGAGG AAGGTGTTGT TGAGGCTAGT GTGCGCCTTG GTGAGAAATT AGCGGTGAAG AAATGGAGTG GTGAGGTTTA TGCGTCGATT AGGAAGAGTT TGTATCCGGA GCTTTGTGGG ATTCTTGGTT TAGAGGCTAG AGTCTTTTCA ACACCTAAGC TCTAAACTCT TTTTGTAACA AAAAG 
Length765
Protein Sequence
Protein Residue
A.thaliana
AGI-codeAT4G14430.1
Descriptionindole-3-butyric acid response 10
TAIR curator summaryEncodes a peroxisomal delta3, delta2-enoyl CoA isomerase, involved in unsaturated fatty acid degradation. This enzyme might also be involved in the conversion of indole-3-butyric acid to indole-3-acetic acid via a beta-oxidation-like pathway.
Alias[ATECI2][ECHIB][ECI2][IBR10][PEC12][ARABIDOPSIS THALIANA DELTA(3), DELTA(2)-ENOYL COA ISOMERASE 2][ENOYL-COA HYDRATASE/ISOMERASE B][DELTA(3), DELTA(2)-ENOYL COA ISOMERASE 2][indole-3-butyric acid response 10]
Gene coexpression
MR
MR Locus Description
3 Ahg919625 prenylated RAB acceptor 1.E
15.8745 Ahg487697 transducin family protein / WD-40 repeat family protein
20.6155 Ahg490334 Protein of unknown function, DUF538
23.9583 Ahg484196 Galactose oxidase/kelch repeat superfamily protein
30.3974 Ahg477473 SMAD/FHA domain-containing protein
37.6298 Ahg480086 Aldolase-type TIM barrel family protein
38.0526 Ahg476207 Protein of unknown function DUF2359, transmembrane
44.8999 Ahg491192
51.264 Ahg482295 hydroxyproline-rich glycoprotein family protein
57.6281 Ahg488581
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression