Detail



ID : Ahg947419

Blast(Query) A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|947419|scaffold_703648.1
Sequence
CCAGTCTGTG AGATATGAAG ATGGCTTTGA AGACAGCACA TGACGGTTGC GTCGAGTGGG TTGGTCGCTC CCGAGAGGAT GATTCATGGA CAAAAGGGTT AGTAGCAGGG CAAGTAACTG ACCTAAGCAG CGAAAGATTG AATCCACACG ACGCTGGATT GGAGCGTCTA GAATTAATCC ATCTCCACAA AACGGCGGCA TTGTTGGAGG AAGCGGCTAT TTTAGGGGTC ATAATGGGAG ATGGAACAGA GGAGGAGATC GAGAAACTTA GAAAGTATGC GAGATGTATT GGCCTATTGT TTCAAGTGGT TGATGACATT CTTGACGTAA CGGAATCTAC TGAGGATTTG GGTAAGACTG TCGGAAAAGA CTTAAGAGCA ACCACAATGG TTGCTCTAAT GGCCGGAAAG CTGACGTATC CAAGGCTAAT AGGTTTGGAG AGATCGAGGG CAGTTGCAGA GAAACTGAAC AGAGAAGCAG AGGAACAACT TCTAAGGTTT CATCGGAATA AGGCAGCGCC TCTGATGGCT CTTGCTAGCT ACATTGCTCT GATATTTTGT ATCAACAGAT CATATCCTCA ACGCATCTAA TCTCCTAACA CGTCCCTTTA GTTCG 
Length615
Protein Sequence
Protein Residue
Map Locationscaffold_7: 19422551.. 19424049
Download Sequence
A.thaliana
AGI-codeAT3G14550.1
Descriptiongeranylgeranyl pyrophosphate synthase 3
TAIR curator summaryEncodes a protein with geranylgeranyl pyrophosphate synthase activity involved in isoprenoid biosynthesis. The enzyme appears to be targeted to the chloroplast in epidermal cells and guard cells of leaves, and in etioplasts in roots.
Alias[GGPS3][geranylgeranyl pyrophosphate synthase 3]
Gene coexpression
MR
MR Locus Description
3 Virus0496
3 Ahg947098
5.19615 Ahg924585 IQ-domain 12
6.32456 Ahg905743
6.32456 Ahg359652
7 Ahg944635
7.74597 Ahg906461
8.48528 Ahg947476
9.38083 Ahg932762
10.4881 Ahg925331
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression