Detail


ID : Ahg947463

Blast(Query):  A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|947463|scaffold_703692.1
Sequence
AGAGGGGGAA GTTGAACATA ATGAAGGACT ACGATGAGAG AACAATTTGG ACAAGTGACC GTCTACCTCT TATGACGTCA TATAACAAAG GCAAGATGCA ACATTCTGTG TGGACAGCCG AATTTATAGA TTCAAACCTT GAAGCTTCTG CTTCATGTTC AAGCGGTGTT GTTCCTGATG CTGTTTTCCC AAAGCGGGTC GCAGAATATG GCAAGCCAAA GGTGCTAAGA AAGCTGCATC TAAGGTGACA AATCCATCTG ATGTTTTCG
Length269
Protein Sequence
Protein Residue
Map Locationscaffold_7: 19713939.. 19714293
Download Sequence
A.thaliana
AGI-codeAT5G05560.1
DescriptionE3 ubiquitin ligase, putative
TAIR curator summaryArabidopsis thaliana E3 ubiquitin ligase
Alias[APC1][EMB2771][anaphase promoting complex 1][EMBRYO DEFECTIVE 2771]
Gene coexpression
MR
MR Locus Description
2.44949 Ahg928093 Tetratricopeptide repeat (TPR)-like superfamily protein
4 Ahg345526 Tetratricopeptide repeat (TPR)-like superfamily protein
7.07107 Virus3808
7.48331 Virus0325
10.9545 Virus0851
11.3137 Ahg936564
21.4942 Ahg903150 NAD(P)-binding Rossmann-fold superfamily protein
21.9317 Virus0674
25.2982 Ahg497165 RING/U-box superfamily protein
27.8209 Virus0118
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression