Detail



ID : Ahg947583

Blast(Query) A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|947583|scaffold_703812.1
Sequence
TGTTTTCAGG ACTCTCATCG ATGAAGTTCT TCTCCGATCA AAACCTCTCT TACGCTGATA TTCTTCTCCC TCACGAAGCT CGTGCTAGAA TCGAAGTCTC TGTTCTCAAT CTCCTTAGAA TTTTAAATTC CCCTGATCCA GCTATCTCTG ATCTCTCCCT GATCAATAGG AAGAGAAGCA ATAGCTGTAT AAACCAAGGG ATACTCACAG ATGTTTCATA TATCTTCCTC TCTACTTCAT TTACTAAGAG TTTCTGAAAA TTCTTGAAGG TAGTTTC 
Length277
Protein Sequence
Protein Residue
Map Locationscaffold_7: 20309416.. 20309907
Download Sequence
A.thaliana
AGI-codeAT1G63990.1
Descriptionsporulation 11-2
TAIR curator summaryEncodes AtSPO11-2, one of the three Arabidopsis homologues of the archaeal DNA topoisomerase VIA subunit (topo VIA). Required for meiotic recombination. Plants homozygous for atspo11-2 exhibit a severe sterility phenotype. Both male and female meiosis are severely disrupted in the atspo11-2 mutant, and this is associated with severe defects in synapsis during the first meiotic division and reduced meiotic recombination. AtSPO11-1 and AtSPO11-2 have overlapping functions (i.e. both required for meiotic recombination) whereas AtSPO11-3 functions in DNA replication. Required for double-strand break induction.
Alias[SPO11-2][sporulation 11-2]
Gene coexpression
MR
MR Locus Description
12.9615 Virus2846
27.4955 Ahg927543 Plant protein of unknown function (DUF868)
28.775 Ahg939663
37.6032 Ahg923686
42.1426 Ahg901956
49.5076 Ahg924375
74.7864 Virus0924
79.4858 Ahg914863
88.3176 Virus1179
89.1628 Ahg474008 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression