| Annotation |
|---|
| Description | jgi|Araly1|947658|scaffold_703887.1 |
| Sequence |
TAGTAGCTTG GGCGATTGTG CAATGGCCAA GGACAATAAT CTGTTGAGCT TGGTTCACGA ACTCCGTGAA CGGGTGGCCG CATCCGCCTC CACTCCGGCT AACAACCTCC GTCACTCTTC CGGAGACGAA GAAGATGCTC TAGAGATTCG ATTTCGGGAT GTCTTCCCTA ATCTTTTGAA TACCTTCGTT GTACCTTCTC TCGGCAACGG GAGGGAAGTT ACAGCTGTTC TGAAGCTTGT TGGTCACACA GCAAGGAACA TTCCAGGAGT CTTCTATCAC GGAAACCCTT GTGCTATCCT CCCTGTCATT GCTCGTATTA TTCCCTTCTT TGCACAACCA GAATTTGTTC CTGGGCATGG AGTATTACTT GAAACTGTTG CCTCTCTCTT AATGTTGCTC CGTTCCAACT CACGGAAGGC ATACCGGATG TTCTTCCATG ACGCTTTGCA GGCCATTCAA GATTTGCAAC GTATTGCATC ACTTCACTCA AATGAACCGG AAATTGCTGA ATCTCACACT CTATTTAGGT GTTTCTGTAT GTCCTTTTCT GGAATCTGGG GTGATTCGTG TCATATCTGT GATCTGCCAG ATGCTAATAA GCCCAGAGAT GGGGATGGTC TTGTGTTGAA CTTATTGGGA GCCAACCGAT GGCAACCTTT TGCTACTTGT ATCCTTAAAC TCATCTGTAA TTGCTTAACT GATGGGACAC TCTACGTCCA GGGTCTCATC CATACATCAT TTGTTCAGGC AGCTTGTTCT CTAGTATGCT GTGGTGGCGC AGATGTGCAG ATGGCATGCT TTGAATTTGC TACTCTTGTC GGATCAATCC TTACTTTCAA CATCCTCCCG CATGTGGGCC TAATACAGTC AATCATCCTC CTTTTAAGTG CAGATGAAGA AGGACTTCCT GTGTACAGGA ATACGATTTA TGATTCTACC ATTGGACGTT TCCTTACCGC GGTATATTCC AGCTGTTCTG ATGTCGCTGT CAAACTAACT GCAGAAAGTT TAGTGTTGGT TTTCTCTCGT GCTTTACAGA GAACAAAAAG TGAAGAGCTT AAGGCTTCCT TGTGCAGTGC GTATGTGCGG ATTGTGAAAT CTTGTCCTCC TTGTATGTGG AAGTTACACT GTCTTCTAGA GTTGCTTCAT CTTTCAGAAC CTTGTTTTCA ATTGATAGAA TGTTTTAAAG CAGTTCTTAT GGTTCTTGGA CCTGGGTATG TTCGAGGTGA GACAACCAAA TGTGGTAGTT ATACATCAGC AGCAAGTGAT AGACCTGTCC AGGGAATTAA CGCTGGAAAA AAAAGGCATA TTAAGGATGA AAGTACTTAC AAAAGGAAGC GCCAGAAGGT TGGTGATGAT ATTCCACGAG GAGTTTACTT TGCTCCTGAA TTTGCCGATG AGACTGATGA AAAAGATGCT GCTAGTCTGC GTGAGATGCT TATTTCAACT GTAGAATCTT TAAAGCCTCC ACCTGCTGGA CCTAGTCTAC GGACTGAAAT TTCAATAGTG GCACTTAGCA TGCTCACCAA TGCATTTTGT TTCTGTCCCT GGACTGACAT GACTCATCGA TTGTTTCACC AGATGTATGC CTGGATTCCC TGGATAGCTA AGCAGGTTGA GGAAAAAAAT CATATCATGT TCGATATGTC TATTTACTTG GAAGGAATTC ACAATCTGCT GCTCGTTGAT TTGGATCCAC AGTATGAATA TACAAGTAAA GGGAATGATC TGGTTGCCAT ACAATTCCTG CTGAAGCTTC CTTGGACGCA CTTCATGCTG TTTAAGAAGC CTAGCTCTCT AGTAAAGTCT AAGTGTTTAT CTGTGGGGAT ATGGACAAAG CTTGGTTTAC AAGACGGGAG TGATTTTGAT ATCTTCAGTT GGTCTCTTTC TGATGATTTT GAACAAGTGC AAGCTGTCGC TGCTATCTAC ATGCCACTCA AAGTTCTTTT CTCTGGTCTT CGTGCCCTTC TTCATATGTT CCCAAAGCTG GAGCATTTGT TGGAAGAAAA GCAATTGATG GTTAAGAAGA CCATTCCTCA GTCACTTGGC TTCTTATCTT GTCTTTATGG ATCAAGTACT ACTGGCTCAG AGAAAACTGC ATGCCATTTA TTCCTACATG AAGATTTAAA GAAAGATGAG ACTCTGAATT CTCTACTTCA AGGGTTCCGA TGTTCAAAGT GTGATAAATT TATCGAAAGC GAAGATGAAA AGCATTTCAG AATCATAGAG ACTCCAGAAA TGGTGAGATT GGAAATGGAT CATCATCGTG ATTACTTTAA CCTTCAATCC TTATATTTTA ATCTTCTCTA TGACGAGTCT TCTGAAGAGA CTCAGCTAGC CTGCGTAGAA GTAATAAGGA GAATTCTTGG CCACACAGCC CCAGATATTC TGGTAAGAAC AAGGTCTCAA TGGATAAGAT GCCTTCAATA TCTGTTAGTT CATGTAAATA CAGGTGTAAG GGAAGCATTC TGTGCTCAGG TTGGTATCTT CGTACAGCAT CCTATTGTGA GCTGTTTGTT TCTTGGTGAA GATGCTACGG AGAAAAGTTG CGAAAGAAAT TTTTTTAATT TGATTGAGCA TTCTCTAGCA ACAGCTAAGG ATCTTCTTGT CATCCAGACT CTATTGGAAA CGATAGCTGA AGTTATGGTA GCTGTTGATG TTACCAGTGA GCTTTTCTTG TTTTGTCTTT TCCTGCTGAT TGATCAGCTT GATCATCCAA ACTTGATCGT CCGAATAAAT GCGTCAAGGT TAATAAATCG GTCATGCTAC ATCCACGTGA AAGGGGGATT TGCAACTCTA CTTTCCAGAG CTGGTCATAT TAAAAATGAG TTGTTTGATA ATCTATCTGT CAGGCTGACC AACCGTCCTA ATGTGGTAAG AGAATTTGCA GAAGCTGTTT TGGGTGTTGA AACTGAAGAA CTTGTGAGGA AAATGGTCCC TGTTGTTCTT CCTAAGCTCT TGGTGTATTG GCAGGAAAAT GCTCAAGCAG CCAATACCTT GAACGAACTG GCCAAGTTAT TAGACACAGA TGTGGTACCT CTAATAGTAA ATTGGCTACC CAGAGTTCTT GCATTTGCTT TGAATCAAAA AGAGGACAAG AATATGCTCT CAGTTTTGCA ATTGTATCAC TCACAGATTG GTTCTGACAA CAAAGAAATT TTTGCTGCTG CATTACCTGC ACTCTTAGAT GAGCTTATAT GCTTTGTGGA CATTGCTGAT ACACCTGAGA CAGATAGACG GCTACAGAGA CTGCCTGATG CAATAAAGAA GATCTCAAAA GTCTTAACAA ATGCCGAAGA TCTTCCTGGA ATCTTACAAA ACCATTTTGT TGGACTCCTA AACAGTATTG ACAGAAAAAT GCTTCATGCA GATGATATTT TTCTTCAAAA ACAAGCACTG AAGCGTATTA AGCTGCTCAT TGAGATGATG GGCCATTATC TCAGCACATA TGTTCCTAAG CTTATGGTTC TCCTTATGCA TGCCATTGAC AAAGATGCAC TTCAGAGCGA GGGTCTCTTG GTCTTGCATT TTTTTACAAG AAAGTTGGCT GATGTATCGC CATCTAGCAT AAAGTATGTG ATTTCTCAGG TTTTTGCGGC ACTCATCCCC TTCTTAGAGA GAGAGAAGGA TGGTCCCCAT GTATATTTAG ATGAAGTGGT GAAAATTCTT GAAGAACTTG TTTTGAAGAA TAGAGATATA GTAAAGCAGC ATATTTGTGA GTTTCCCCTC TTACCTAGCA TACCATCTTT AGGAAAATTA AACAATGCTA TTCAAGAAGC ACGTGGATTA ATGAGCCTGA AGGATCAATT GCGGGATATT GTAAATGGTA TGAAACACGA GAACCTGAAT GTTAGATACA TGGTGGCATG TGAGCTAAGC AAATTGTTGT ATCACAGAAA TGAAGATGTT GCTGCACTGA TTGCCGGTGA ACTTGTCCCA GACATGGAGA TCTTGAGCTC TTTAATCACA TATTTACTAC AAGGGTGTGC AGAAGAATCT CGAACTACAG TGGGTCAGAG GTTGAAGTTA GTCTGTGCAG ATTGTCTTGG AGCAATAGGT GCTATTGACC CTGCCAAAGT GAGAGTTGCT TCATGCAGTC GTTTTAAAAT CCAATGCTCA GATGATGATC TTATCTTTGA GCTCATTCAC AAACACTTGG CAAGAGCTTT TAGAGCTGCA CAGGATACAA TCATACAAGA CTCAGCTGCT CTTGCCATAC AGGAATTACT AAAGATTGCT GGTTGTGAGC CATCATTAGC TGGGAATGTT GTTGTGTTGA CCCCCCAGGA GCATGTACAA GTCAATGTAT CTGGTTCTAG AAGATGTGGA GGTAACAAAG AAGTGAATGA AAGGGGACAA AAACTATGGG ATCGGTTCTC AAACTATGTT AAAGAACTAA TAGCTCCCTG CTTGACTTCA AGGTTTCAGC TTCCAAATGT GTCTGACCCT GGATCAGCTG GACCAATTTA TCGGCCTTGT ATGTCATTCA GAAGGTGGCT ATCCTACTGG ATAAGGAAAT TGACAGCACT TGCAACTGGA TCCCGTGTAA GCATATTTGC TGCTTGCCGA GGCATAGTGC GTCACGATAT GCAGACAGCT ACTTATCTCT TACCATATTT AGTTCTGGAT GTTGTTTGCC ATGGGACTGA GGCAGCACGG CTTAGCATTT CTGAAGAGAT CCTTTCTGTT CTTGATGCTG CTGCATCAGA AAATAGTGGA GTGACAATAA ACAGCTTTGG TGTTGGTCAG AGTGAAGTTT GTGTTCAAGC TGTTTTCACG CTTCTTGATA ACCTTGGGCA ATGGGTTGAC GATGTGAAGC AGGGAGTAGC ACTCTCATCG TCTATGCAGT CATCAGGTGG TAGGCAAGTA GCACCCAAAT CGAAAGACCA GGTTACAACC TCAACAACAG AACAGGATCA TCTTCTTGTA CAATGTAAAT ATGTGTTGGA GCTTTTGCTT GCTGTTCCCA AGGTGACCCT TGCTAGGGCA TCTTTCAGGT GTCAAGCTTA TGCCAGGTCA TTGATGTACC TTGAATCCCA TGTACGTGGA AAGTCAGGCT CCTTAAATCC CGCAGCTGAG AAGACAGGCA TCTTTGAAAG TGCTGATGTT TCTTCTCTGA TGGGAATATA CAGCTGCCTT GACGAGCCTG ATGGTCTTTC GGGCTTTGCA AGTTTAAGCA AATCATTAAA TTTGCAAGAC CAATTGTTGA TAAATAAGAA ATCTGGTAAC TGGGCAGAAG TTTTTACCGC ATGTGAACAA GCCCTTCAGA TGGAACCAAC ATCAGTTCAA AGACATTCAG ATGTTCTTAA TTGCTTACTT AACATGTGCC ACCATCAGAC AATGGTCACT CATGTTGACG GACTAATTTC CAGAGTACCT GAGTACAAGA AAACGTGGTG CACACAAGGT GTACAAGCTG CATGGAGACT CGGAAAGTGG GACTTGATGG ATGAGTATCT TGATGGAGCT GACGCAGAAG GTTTACTATT CAGTAGCTCA GACAGCAATG CCTCATTCGA TAGAGATGTA GCAAAGATTC TTCAAGCAAT GATGAAGAAG GATCAATACT CTGTAGCTGA GAGAATAGCT ATTTCCAAAC AAGCTCTCAT TGCTCCTCTA GCTGCTGCAG GCATGGACTC CTATACACGA GCTTATCCTT TTGTTGTCAA ACTTCACTTG CTAAGAGAGC TAGAGGACTT CCAGGCGGTT CTTAATGGGG ATTCATATTT GGAGAAATCA TTTAGTACAA GTGATCAGGT GTTTTCGAAA GCAGTAGATA ACTGGGAGAA CCGGCTCAGA TTTACTCAAT CATCATTATG GACAAGGGAA CCTCTCTTAG CTTTCCGAAG ACTCGTCTTT GGTGCCTCTG GGCTTGGTGC TCAAGTTGGG AACTGTTGGC TTCAGTATGC AAAGCTTTGC CGTTTGGCTG GTCACTATGA GACAGCTCAC AGGGCAATTT TGGAAGCTCA GGCTTCTGGT GCACCTAATG TTCACATGGA AAAGGCGAAA CTTCTTTGGA TCACTAAGCG TTCAGACAGT GCAATCATAG AGCTACAACA ATCTCTCCTG AATATGCCTG AGGGTGTTGT TGACTCCACT GTAATTTCTT CGATCAATAG CTTACTGATG GCTCCCCCAA ATCCAGAGCC AACAGTTCGT AACACACAAT ATTTCAAAGA AAAAAAAGAT GTCGCAAAGA CTCTTCTTTT GTATTCCAAA TGGATCCATC ACAGTGGGCA GAAACAAAAG AAAGATGTTT TAAATCTTTA TACCCAAGTC AAGGAATTGC TGCCCTGGGA GAAGGGATAT TTCCATTTGG CTAAGTATTA TGATGAACTA TATGTTGATG CAAGAAAGTG TGAACAAGAG AGCTCTGTAT TGAGCTCTGC AGGCAGTAAA AAAGGATCTG TCTCGTCGAA CTTAAGCACT GAGAAAGCAG GGTGGGATTA TCTATTTAAG GGAATGTACT TCTATGCTAA GGCACTTCAC AGTGGGCACA AGAATCTCTT TCAAGCACTT CCGAGGTTGT TAACACTATG GTTTGACTTT GGTACTATCT ATAAAACAAG TGGCTCAGTG GGAAATAAGG AATTGAAAAG TACTCATATG AAGATAATGA GTTTAATGAG GGGTTGCTTA AAGGATCTGC CAACCTATCA ATGGTTAACT GTGTTGCCTC AGTTGGTTTC TCGAATCTGT CACCAGAATG GGGATACGGT ACTAATGGTT AAAAATATCA TCATTTCTGT TCTACATCAA TTTCCTCAGC AAGGCCTCTG GATTATGGCA GCTGTTTCAA AATCTACTGT TCCTGCTAGA AGGGAAGCAG CTGCAGAAAT CATACAAGGT GCACGAAAAG GTTTTAACCA AAGTGACAGA GGCCACAATT TGTTCATTCA GTTTGCTAGT TTGACTGATC ATTTCATTAA ACTATGCTTC CATGGAGGAC AACCAAGATC CAAGGTTATC AATATAGTGA CTGAATTCAG TGCCTTGAAA AGAATGATGC CGCTGGATAT CATCATGCCA ATTCAACAAT CGCTTACCAT TAGCCTACCA GCATTCGATA TGAACAACAA TGAAGGACAC TCTGCCAGTG TCTTTTCCGG TTCAGATCTA CCAACTATTT CTGGTATAGC CGATGAAGCC GAGATACTTT CTTCCCTTCA GCGGCCAAAG AAGATCATTC TGCTGGGAAA TGATGGTATT GAGTATCCAT TCCTCTGCAA GCCCAAGGAT GATCTCAGGA AAGATGCTCG GATGATGGAA TTTACTGCAA TGATAAACCG CTTACTATCC AAATATCCCG AAAGCAGACG AAGGAAGCTA TATATCCGCA CCTTCGCAGT AGCTCCTCTG ACTGAGGACT GTGGTCTGGT CGAGTGGGTT CCACATACAC GTGGACTCCG CCATATTCTA CAAGATATAT ACATTTCATG TGGGAGGTTT GATCGGCAGA AAACAAATCC TCAAATTAAA AGAATATATG ATCAATGTGC TGTTAAAAAG GAGTATGAGA TGCTGAAGAC CAAAATCCTC CCTATGTTCC CTCCGGTTTT CCATAAATGG TTCTTGACAA CGTTTTCTGA ACCAGCTGCT TGGTTTAGGT CACGTGTAGC TTATGCTCAC ACCACAGCAG TTTGGTCCAT GGTTGGGCAC ATTGTTGGAC TTGGTGACCG TCATGGAGAA AATATTCTCT TTGATTCTAC TTCAGGTGAT TGTGTTCATG TAGACTTCAG TTGCTTATTT GACAAAGGCT TACAACTGGA GAAGCCTGAG TTGGTGCCAT TCAGATTGAC CCAGAACATG ATTGATGGTT TGGGCATCAC TGGATATGAG GGCATCTTCA TGAGGGTATG TGAAATCACT CTCACAGTGT TGAGGACACA TAGGGAGACG TTGATGAGCA TCCTGGAGAC ATTCATCCAT GATCCTCTTG TGGAGTGGAC AAAATCACAC AAATCAAGCG GAGTAGAAGT TCAAAACCCA CATGCTCAGC GGGCCATAAG CAGCATTGAA GCCCGGCTGC AGGGCGTGGT TGTTGGTGTT CCGCTACCGG TAGAAGGTCA GGCTCGCCGG TTGATTGCCG ATGCAGTCTC ACTTGAGAAT CTTGGGAAGA TGTACATCTG GTGGATGCCC TGGTTCTGAT GAAAATCTCT GAACACCAGC TGTT |
| Length | 8174 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_7: 20678562.. 20688554 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT5G40820.1 |
| Description | Ataxia telangiectasia-mutated and RAD3-related |
| TAIR curator summary | Encodes a Arabidopsis ortholog of the ATR protein kinase that is involved in a wide range of responses to DNA damage and plays a central role in cell-cycle regulation. Dominant loss of function alleles identified as suppressors of ALS also exhibit increased tolerance to aluminum. This may be due to the inhibition of terminal differentiation of the root apex upon exposure to Al. |
| Alias | [ATATR][ATR][ATRAD3][ARABIDOPSIS THALIANA ATAXIA TELANGIECTASIA-MUTATED AND RAD3-RELATED][Ataxia telangiectasia-mutated and RAD3-related] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 4 |
Ahg888078 | Protein of unknown function (DUF3414) |
| 4.47214 |
Ahg940314 | peroxisome 1 |
| 8.24621 |
Ahg336756 | |
| 9.74679 |
Ahg931346 | |
| 10.583 |
Ahg483241 | Nucleoporin interacting component (Nup93/Nic96-like) family protein |
| 12.2474 |
Ahg480587 | pentatricopeptide (PPR) repeat-containing protein |
| 12.8841 |
Ahg475632 | Leucine-rich repeat (LRR) family protein |
| 13.2288 |
Ahg496360 | DCD (Development and Cell Death) domain protein |
| 14.0712 |
Ahg943674 | transducin family protein / WD-40 repeat family protein |
| 15.2643 |
Ahg476621 | plastid transcriptionally active 2 |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|