Detail



ID : Ahg888078

Blast(Query) A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|888078|Al_scaffold_0007_64
Sequence
ATGTTCAAGC CACCGAGTGA GAAATCAAAA GAAGCTTTGA ATTCGGATGT AGTCAAAATT AAGGAGCACC AGTTGGTGAT AAAGCCCCAG TTGAAAGATA AAGCGCTTCG AATCAGCTCT CATCTGAATC TAGATGAAAT CCAATCATAC ATCCTCGTGG AAAGATCTAT GGAGCAGGAA TATGGAACCA CTGACTCGGT TGCTCAAGAA TTAGCTCAAG AATTCATAGA CATGTTTTCA ACCCTTCTTT CTTCAGCTTT CGTGCTAACA CTTTTGCTGT CCTTCTGTTT TCTTGAAGAT ACTGCTTCAG TATTACATAC AGCGCCAGTG CCTACTAAAG TGTACAAAGC GTATTCTCAT ACATGCATAA TTTGTACAGT ATATGCGCCA AGTGAGGAAA GTACAATTAA GGAAGAAGCT GTAAAGCTGA TCTCAGATGG GCTTGAAAGA CGACAATCAT CAGTTTTCGA GGACCTGTTT TCCTCTTGTT TTCCACAGAA TATGGGGATT CTTTCAGGTT CATATAATTT TAGAAAGCTG GCTGTGTCAG TTGAAGCACA GCATTCTGCA TGTCGTGTTC AAATTCAGTT GCTGATGATT CTTATAGAAA CGTTGGATAT GGAGAATCTG TTACAAATGG TTCCCGACGG AGTACCTTTC AGGTCTGGCA CTTGTGTCTT TTCCATTGTT GATGTCCAAG AGATGGATGC AACAATCTCA AGCCTCAACA CTTTTGAAGT AAAAGAAGCA GGACCTCTCG TCCTGGCTTG GGCAGTATTT CTGTGTCTTA TTTCATCACT TCCTGGGAAG GAGGAAAGTC CTTTCCTGAT GGATATTGAT CACGTGAGCT ATGTTCATCA AGCTTTTGAG GCAGCATCCT TGAGCTATTT CCTTGAAATC CTTCAAAGTA ATCTATTGAA TGATTTTGAT GGACCAATCT CTGGTCATCG TAGTGTCGTG AGGACTTTTA TTTCAGCATT TATTGCGTCT TATGAGATCA ATCTTCAGCT GGAAGATGGC ACCCTCGAGT TGATACTGGA CATCCTCTGT AAGGTTTATC AAGGAGAGGA GTCCCTCTGT AGTCAGTTTT GGGATCGAAA AAGTTTTGTT GATGGCCCTA TCCGGTGTCT CCTCTTTGAT CTGGAGAGTG AATTTCCATT CAGAAGTGCT GAATTCATTC GTCTCTTGTC GTCCCTGAGT GAAGGAAGTT GGCCTGCTGA ATGTGTATAC AACTTTCTGG ATAAATCAGT CGGGGTATCA ACCTTATTTG ATATTACTAG TGACTCTCCA GCGGATGAGG CCTCTCAACT TATTGAAACT TCCCGGCCGT TGCATATTCC AGGTCTTGAA GGATTAGTTA TTCCCAGTAA TACTCGTGGG CGAATTCTGA GAGTAATCGG TGAAAATACT GTCCTTGTAC GGTGGGAGTA TTCGCTATCC GGCGTAATTG TGTTGATCAT CCGTTTGGCC AATGGACTCT ACATTGGTAA CAATCGTGAA TCTTTTGTGA CTCTGGAGCT ACTTCGTCGG ATGGTGACAT TTAACAAGGC CGTATGTTTC TCCTTACTGA ATATGAGCCA CTTCTTTTAT GTTCACGAAT CTTATGTGAA TGGGAAGATG GAAAGTGATG TGAGGGTGGT TGATATAATT TGCAATTCAG TCAGAAGCCT GACTTTTGAC TCTGGCGGTG CAGCTGTGAT GGCAATGGCT ATTGATATCT TAGCTAGACT TCTGCGATGG TAA 
Length1743
Protein Sequence
Protein Residue
Map Locationscaffold_7: 212661.. 216782
Download Sequence
A.thaliana
AGI-codeAT4G38760.1
DescriptionProtein of unknown function (DUF3414)
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
3.16228 Ahg950033 SPFH/Band 7/PHB domain-containing membrane-associated protein family
4 Ahg947658 Ataxia telangiectasia-mutated and RAD3-related
4.69042 Ahg478117 Thymidine kinase
5.38516 Ahg892608 Mitochondrial transcription termination factor family protein
9.53939 Ahg891097 RNA-binding (RRM/RBD/RNP motifs) family protein
12.3288 Ahg322445
14.1774 Ahg338653 SET-domain containing protein lysine methyltransferase family protein
16.6132 Ahg933117 topoisomerase II
16.9706 Ahg940314 peroxisome 1
18.3303 Ahg473458
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression